Microarray Probes on PGSC0003DMT400049820
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_20357_PI426222305 |
JHI_St_60k_v1 |
TGGTGTTAAACTCTTTGCTCTCAAGGTTAATCTTCTCTTCTTTAGATTCATGGGCTTCAT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400049820
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400049820 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G03090.2 |
+1 |
9e-39 |
141 |
66/126 (52%) |
methylcrotonyl-CoA carboxylase alpha chain, mitochondrial / 3-methylcrotonyl-CoA carboxylase 1 (MCCA) | chr1:739715-743819 FORWARD LENGTH=734 |
Transcript Sequence (518 bp)
>PGSC0003DMT400049820 518 pgsc_dm_v3.4
CCGATCCAAATGTAGTTAGCCAAACTTCCATTTTTGCAGGATCAAATTGAGCATATTCAC
ATCTGGCATGGCGACTCTCAACATCACTTTAAACAAAGGATGGGCCTCGAAATCTATGAC
GACGACGAAACAATAGACAAGCCTGCTAGGGTGGCGACATCTTATCCTTCCGGCACTGTG
ATTGCACCCATGGCTGGGCTAGTGGTTAAAGTATTGGTGAAGGATGGGGAGAAAGTTCAG
GAGGGACAACCTGTGTTGGTATTAGAAGCAATGAAGATGGAGCATGTCGTGAAAGCACCA
GCTAATGGTTATGTAAGAGGGCTTGAAGTCAAAGTGGGCCAATCGGTCCAAGATGGTGTT
AAACTCTTTGCTCTCAAGGTTAATCTTCTCTTCTTTAGATTCATGGGCTTCATTCACATT
TATATTTAATAATAAATATTGCATAGAACATTTTAAACGTTGGGAACAAGCATCAGGCTG
CTATGGCTTTTTTTAACATTCTGGGCATCAAGCAAAAG
