Microarray Probes on PGSC0003DMT400049791
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_20349_PI426222305 |
JHI_St_60k_v1 |
CTTCCCAGATTCTTCAAACACAACAATTTCTCAAGCTTTGTCAGACAGCTAAATACTTAT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400049791
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400049791 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G22830.1 |
+1 |
7e-66 |
225 |
130/280 (46%) |
heat shock transcription factor A6B | chr3:8078981-8080895 FORWARD LENGTH=406 |
Transcript Sequence (2028 bp)
>PGSC0003DMT400049791 2028 pgsc_dm_v3.4
ATTGCTGACTCTTCTTTTTTTATTAATAGCCTTTTAGCACTTACTTCCAAAGCTTCTTTA
TCCATGGTGTTCAGAGCAATTTATTCACTAAAATAACTCAACTTCCTAACTGCATAAACT
ACCTTACCCAAAGAGAAACTTTCCATTTCCAAAATCCAAAATCCAAACTTTTTTCTTCCT
AAAAATACATATATTTTCCCCTGTTTCTTGATGATGAATCAATTGTATTCTGTTAAAGAG
GAGTTCCCGGGGTCAAGTTCTGGTGGGGGTGAGCCCCCACCGCTGACACCACAACCAATG
GAAGGGCTTCATGACATTGGTCCACCACCATTCCTTACAAAGACATATGAAATGGTGGAT
GATTCAACTATAGATCATGTTGTTTCTTGGAACAGAGGAGGTCAAAGCTTCGTAGTCTGG
GATCCTCATGCCTTTTCAACTACACTACTTCCCAGATTCTTCAAACACAACAATTTCTCA
AGCTTTGTCAGACAGCTAAATACTTATACGAATTAAGATCTGGTGATGTTCCTCTGATGA
ATCCTTCAAGTTCTGGTGGTTGGTATAACATATTAAAATATTCATCGTGCTGCGGACCCA
AAAAAAAAAAAAAGCACTAGTGTCAAGAATTGTTTGCTAAGATGGATCTTGGAAAAATTT
GGAAGATGATGATACTAAGCTGTAGATGGGATTTGATTGTTGCAGGGATTTAGAAAGATT
GATCCAGAGAGATGGGAATTCGCAAACGAGGCATTTCTAAAGGGGAGTAAGCATCTTCTA
AGGAACATCAAGAGGCGAAAAACGCCTAATTCTCCTACAGAGCAAGGTCTCGGTCCTTGT
GTCGAATTGGGAAGATTTGGATTTGATGGAGAAATTGATCGATTGAGGCGTGACAAGCAA
GTATTGATGATGGAACTAGTGAAGCTTAGACAGAATCAACAGAATACTCGAGCTTACATT
CGATCTTTGGAGGTAAAGTTACAAGGAACAGAGAGGAAGCAGCAACAAATGATGAATTTT
TTAGCAAGAGCTATGCAAAATCCGGAGTTTGTCCATCAGTTAATCCATCAAAAAGGGAAG
AGAATAGAAATTGAAGAGGATATAACTAAGAAAAGGCGACGACCTATTGATCATCAAGGT
CCTGTTAGTACATTACATGTTGGAGGATCTAGCCATTACATCAAATCAGAACCCTTGGAA
TTCGGAGAGGCTAACGGATTCCAAGTGTCTGAACTTGAAGCACTTGCATTAGAAATGCAG
GGATTTGGTAGAGCAAGAAAAGATCAACAAGAAGAGTACACGATAGAAGGGCTTGAACAA
TTTGGCAACACAGATAAAGAACTTGATGAGGGGTTTTGGGAAGAGCTATTTAACGATGAG
GACGTGTCTGGAAATGAAGACCGTGAAGAGGAAGATGTAGATGTCTTGGCAGAAAGTGAG
TTTTCAAGTTTTCAACGACGAATGAAGAAAGCAGCTATATGGATCAACCAGCTACTCGTT
GGATAGATTCATGAAGGACTCAAGAGTCAAGTCTGAAAATCCCTTGTTGGTTTTTCTGGT
TACTATTTATGTTCTCAGTTATTGGTTTCCTTTCAATGCCTTTGTTACATCTCTGCCTCT
TATTCTTGTTTTTTTTCTCTGGATCCAAATGCAGGCATAGGTTATGCAGAATTTGATCAA
GTCTATGGTCTTTCAAGGTCATTTTGGGTAATAAAAAATGTCAACGAGTGCATGTTGAAT
TCTTCAAAAGTAATGTATTTTTGAAGAAACTGATACGAGTGCGGCATCAAAGTAATATTG
AAATGTTGTCCTTGCTTGTGTGGTGAATAGATTGTTGTCTTTATGATGAAGACATAGGTA
ACAAACAGAAATCCCAATTACATCAGAATCAAGATTTCACCACAAGTGGCGGTTTGTAAC
TACTTTGCTGACAAAGATTTAATTTGTTTGCCATTTAGTGTCCTTGTCTCTATTTGTGAG
AAATGAATCATGTCCAATTGTCCATGTTCCATATAAAAAAAAATCTCC
