Microarray Probes on PGSC0003DMT400047955
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_45926_PI426222305 |
JHI_St_60k_v1 |
TACTAGGACTATTCATCTTTTAGAATTTCATTTTCACCGTGAAGTTGGGATCCGTGTCAC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400047955
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400047955 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G60620.1 |
+3 |
1e-68 |
238 |
110/134 (82%) |
glycerol-3-phosphate acyltransferase 9 | chr5:24367266-24369647 FORWARD LENGTH=376 |
Transcript Sequence (3890 bp)
>PGSC0003DMT400047955 3890 pgsc_dm_v3.4
GTGGGAGACGTGTCGTCAAGGGTTTGGATTGCGTGAGAAAAACTAGTGAGCGAAATCCTC
CTGGATATATATAAAGATTCAACAATTGTTTGTATTTTGATAGATAAATTACTACTGCAT
GTTAAATGTTGAAGCTCCGAATTGGAGTTGGATGGACCCGACTATCTACGCTCTGAATCC
ATTCAAGAACCACCATGGCCTTACTGCGCGATTTGCCCCCACCCTAACTGAGGCTGCAGG
TGCCATTATTGACACCCGATGCTCCAAGTCGAATCCGCCAGAACCTTGGAACTGGAACAT
TTACTTGTTTCCTTTATGGTGCTTGCGGGTTGTTGTTAGATATGAGATTCTTTTCCCCAT
AAGAGTTCTTGTCTTGACAATAGGATGGATAACATTTCTCTCTTGCTATATCCCGGTGCA
TTTCCTCCTTAAAGGGCACCATAAGTTCAGGAAAAAACTAGAGCACTCTATCTGGTGAAA
TGCTGAACAATTGGGTTCAAACAAGAGCAGGCACACTACTTTTTGAGGAAATCAATCTAG
TTCATAAGACTTCTGCAAATTATAGCAGATGTTGATACTGAAATTGGTTTTGGAGAGAGC
TTCACATTTATATACTGGTTTGTACTACTTGTTAAAGCTTCTTTATTTACACTACACTGT
TGGTGAAGATAATGGAAAGACTAGTTCTTTTAACTTGGCATATGGATAGAAATTACTGAA
ACTTGTGCTATAAAGTTTCCCAAGAAATAGGAATATGTTCCAAAACAAACAATTGAAGCA
AGCATGAGATTTCAGTGTATGAACAGAAATTACTACAGCTGCAGACATTAGGAAACACAA
TTAGCAATGGAACGCTTCATTATGTTGATTAGCTTTGGAAGTTGCTTATTGTGTCTGGAC
CAGGTTCTGCCACATTTGTGTATATGTTCAAGTATGATCTTGGATAAAAAATGAGGTAAA
GCACATTGAAACATTACATAAGGAATCTGCTATATCTGTCTCAATCATTAGCTTTTGCAA
ACAAAACTAGTCATAAAAGATATTCAGATACAGTATGGACTATGCCCATAGTTCTTTTTT
CTTTAGCTTAAGCTTCTGTCTGATTTTCTTTCTTTGTTTGGTCCACCAAACTGACCTTTT
TTCCTTTTCCTTAGTATCCGGTTAACACTTAAAACAAAAATCATCTAACAGAATGCGACA
GAGAAACTATCCCTATTTAGAAACTAATTCTCGGTATTTAGTGGCACCATGTATTATGGG
ATACTATCCCTAAAATTTTAGCAATCATGATGGAAACAAACCGAACCTACCAGTACTCTT
ATATATAATCAAAAGACGTAGTATTCAAATCAAAACAAGAATATTCTAATAAGAAATACA
ATGTTCAAATGAGTGCTCAACAGATATTCAAATCAACTTGAGAGTCAGCCACTGGCACCC
GACAGTGTCTTGACCCCCATCCAATTTGGGGCCCACCTGAGTAAGATAAATTGGCACGAT
TGTTTGGAAATTCTCTATTATGATTTAAGAGGTCTAGACTTGCTTATGTTGCACTTTTGT
TGTTCTCTTGAAGAGTATCTATACATACTAAGGTTTCTGGCATCCTTGCTTTGATTAAAT
TTCTTAGAGGATTCTGTTTGAGCTGATATGCAGTTTCTTTGTTGCATCTTGGACTGGGGT
TGTCAAATACCACGGCCCACGACCAAGCATACGACCTAAGCAGGTTTTTGTGGCAAATCA
CACGCCAATGATTGATTTCGTTATCTTAGAGCAGATGACTGCATTTGCAGTGATCATGCA
AAAGCATCCTGGATGGGTTGGATTACTGCAAAGCACCATTTTAGAAGGTGTTGGATGTAT
CTGAACCGCTCAGAAGCCAAGGATCGTGAAATTGTAGCACGGAAGTTCGTAATGTCAGAA
GAATCATTATAGACATCTCACTCTGCAGTGTTTTTCTTACATAATTTAATTTTCAGGTTG
AGGCAACATGTTGAAGGGGCCGACAACAACCCTCTTCTTATATTTTTTTTTTTTTTTTGA
TGACAAGGGAAACCCGTAGCCGCTACCCTTTGGGTGCACACAGGGTAAAACCCCTGCTCC
TATGCAATAGCTCGCAAACCACATAGGAGAGGTAACCCGCACTAGGCAAACCTGGTGCGA
CGAGCTTGACCCAGAAGGCAAACCCCTTGCTTTCGCTGGCAAGGGGTTTCGAACTTGAGA
CCTCCAACGTGGAAGTCCCAAGCTCAAATCACTGGGCCACCCCGAAGGGTGACCCTCTTC
ATATATTCCCTGAGGGAACTTGTGTAAATAACCACTACACTGTCATGTTCAAAAAGGGAG
CATTTGAACTCGGCTGCACTGTTTGTCCTGTTGCAATCAAGTACAACAAAAAATTTGTTG
ACGCCTTTTGGAATAGTAGAAAACAATCCTTCACAATGCACATTTTGCAGCTCATGACAT
CTTGGGCTGTAGTCTGTGATGTTTGGTACCTGGAGCCTCAGAACATAAGACCTGGGGAGA
CTCCAATCGAGTTTGCAGAGAGGGTGAGGGACATCATTTCTGTTAGAGCAGGTCTTAAAA
TGGTTCCTTGGGATGGATATTTGAAATACTCTCATCCTAGCCCCAAGCATCGAGAGAGGA
ATGAACAGTTTGTATGTCCAGGCAGCAGAATTTTGCAGAATCAGTGTTGCGTCGACTGGA
GGAGTAGTAGATAATTGGATGTATGTTTTTTGTCTCCATTTTCACTTTTGGCTTGAGAGC
CGTTCAATTTGGAATAGTTGTCATATTATTCTTCCTTGTCAGCTTGACGTTTTGTGTTTC
ATCACTTTCTCTAACCATAGTTAAAGAGTAGAAAGTTGACAGCAATTGTGTGTGAAGCTC
ATTGCTTAGTCTTTATGGTTTTGGATGTCCACGCAATCCTAAACTTTGTGACTGTCATTT
TGTGGTTACTCTTCCATGATGAAGAAGATACTCTGTGTGTGTGTGAAAAAGAGAGATGAC
TGCTCTCTCCAATGGTGGACAGATGGGTTCAAATTCCATCTTTGGGTAATTTTTTTTTTA
TGACAAGGAAACCCGCAGTCGCTATCCTTTGGGTGCGCATAGGGTAAAATCCCCGCTCCT
ATGCAATAACTTGCAAACCACATAGGAGAGGTAAGCCAGTGCGACGAGCTCGATCCAGAA
GCAAACCCCTTGCTTTTGCTGGCAAGGAATTTCAAAATTGAGACCTCCAATATGAAAGTT
TCAAGCCCAGACCACTCGGGCAGAATGCTGAATAAACTAAATAATGTTGGCTGTTGTTTT
CTTGTGCACGTGGTTTTCCCAGTCATTGTCGTTTGTGAAATTAATTGTTGGCTAGGGAAT
CCCAGAAGAAATTAAGACAAAGAGTTACCAACTCAAGTGTTTGTTTGTTTTTCCAAAGTT
TAATGATTCTTTTTGGTGGGAATATTTATTTGCCCAAAGTTTGAAACCCAAGGCCTGGAG
TAACAATCGCTGCAGCCTTTACGTTAGAAAGGAATTTCTTACAAATTCCAAAGACCTAAA
AGAATCATTTTAATTCCCATGATATGAATTACAAGACAACAACAACCTGAACAGAGGTTG
TCAGCTGGTCAATTTTTTCACACATGTTTGGCCTCTAATTATTATGATATAATAATTCCA
ACCCTTTTTCTCTATTTACATGTTTGATGTTGATCTTGTTTTAATGTGTGTTTTTCCTTT
TTCTCCTCCAAAAGTTGTTGCATATGAAGTTAAAGATAAATATTTGATACCATATAGTAC
ACTTTTTGACTGAGGGAAAATTTTGAACTTTGGGGACCCTATCTATACTATACTAGGACT
ATTCATCTTTTAGAATTTCATTTTCACCGTGAAGTTGGGATCCGTGTCAC
