Microarray Probes on PGSC0003DMT400046380
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_8700_PI426222305 |
JHI_St_60k_v1 |
CTGAGTCAAACACTTACAGCCCATTTATATGGGGTTTATGATGGACATGGAGGCTCTCAG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400046380
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400046380 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G57050.1 |
+2 |
3e-64 |
224 |
125/238 (53%) |
Protein phosphatase 2C family protein | chr5:23087720-23089303 FORWARD LENGTH=423 |
Transcript Sequence (2782 bp)
>PGSC0003DMT400046380 2782 pgsc_dm_v3.4
ATGATTAGTCTCTAATAACAAATCCTTGCATGCATCCTTTCTTGATTTGTTTGACTCTTG
AATTATATGGGGTTCTCACAAACCTTTTTTTTTTTTGATTCAACTAACTTTAGGTAATCA
AGAAGAAGTTGGGTTGCTTTGAATTTGGAAAAAAGTTTCATGTTTGGTCTGCTTTGAGCT
TGTAAGTCCTTTTTTTTTCAATAAAGTTTGAATCTTTATATGTTGTGTTCTGTCTTGTTA
AGCAGTGACCACTAGATTTGTTGTTTCCTATATATTATAAGTTGATAAAAAGTGTTTCTT
TGTTAAGGGGGTTTGTTGCTAATGTGTTGTTGAATGGATAGAATTGGAATAGAAGAGTAC
AAGATGCTGAATAGGGTTTTATGGATAGTGATTCCACAAGTTTGGACTTTGGATCCATAT
TCTCTTATGTCATAGATTTATTCTGTTTTTTTTTTATGTCAAAACTTTTCTTGGCTTACA
ACTTAAGTAAATTTTAGGGATTTGAATAATTTTGGTTGGTTAGAAGATGGAAGAGATGTT
TCCAGCACTTACTGTATCATATAAACAGGGAAAATTGATATATGATGAATCAGTATTACC
CACATGTATTGACTTCGCTGAATATGAGCTGATCCCGAATACGACTAGCTTGCTATCAGA
ACCTAACAAGTGCAAACTTCCTTGTTCGGTGTCGAATCATAGTGTGTCCAGGGACAAAGC
TAACCTCTTTATGACAGTTGCTGATTGCCATGAAATCAGGAAAGGGAAGAGTTTTTCTTC
GACAGTTGTAGCTAATGGGAATTGTTTGATTGCTAGTGAGGTAAAAGATGGTAGATCTAT
GGACAACAATTTGATTTCACCAACTGATGAGCTTTTAGGAAATATGACTTGTTCTGATTC
TCTAGTGGATGAGTGTGGCGGCATGCCTAACCAAGAATGTACAGATTTGGAGGTTAAAGT
TGGGAGAACTCCTCCTCGGAATGAAGACAAGAAGGTTGGTGTATCCCAGATTCTGAGGAA
GTCTTTTTCGTGTAATTTGGCTAAAGAGTTGGTTAATGAGTCAGAACTTGTAAGTGATCT
TGTTTCCACTATGGTTGTGGGTGCTGAAGATTATAAAAGAAAATTATCACCATCCCATCT
TGAGACCTCACAAGAGATAAAGATAAGTAGGCCAAATGCCTTTTGTTTTGATTCTGTACC
GCTTTGGGGGATCATCACGATACAAGGAAAGAGGCCGGAGATGGAAGATACTGCTATAGC
TTTACCAAGGTTTCTGAGAATCCCTTCCCATATTTTGACGGATGCGCCAGTTTCTCATGC
CCTGAGTCAAACACTTACAGCCCATTTATATGGGGTTTATGATGGACATGGAGGCTCTCA
GGTTGCTAATTATTGTCATGAGCGTCTCCATATGGTTTTAGCACAGGAGATAGATATTAT
GAAAGAGGATTCACATAATGGAAGTGTTAACTGGAAGGAGCAATGGTCAAAGGCTTTCTT
GAATTGTTTCTGTAGAGTCGATGATGAGGTAGGAGGGTTCTGTAGTGAAACAGACGGGAT
TGAGCCTGACCTTTCAGTCATTGCTCCCGAAGCAGTTGGATCTACAGCTGTAGTTGCAGT
TGTTAGTCCAACCCATATTATTGTTGCTAATTGTGGTGATTCAAGGGCAGTCCTTTGTCG
GGGAAAACTGCCCATGCCATTATCCATTGACCATAAGCCAAATAGGGAAGATGAGTGTTC
ACGAATAGAAGAATTGGGAGGGAAGGTCATTAATTGGGATGGACATCGCGTTTCTGGTGT
TCTTGCAGTTTCAAGGTCAATTGGTATGTATATTGTACTAGCCACACCTGCAAATTTCAT
TGTACTGCTGTATTTTTACTGGAGAGGGTTAAGAAAGTCATCTATATTGTGCTTGATTTG
CACATGGAAATAAAGGAATCTCAAAGCTACGATGGAGCAGACCTGCACATGTACCAAAAT
TAAAGTGTTATACCATACATATATAGTGTCAAAGTTCATCCCTGAAGCAGCCCACTGATG
TTGGATAACGACGTCTGACTTCAGTTGACATGGTTGTCATTTATTATTTGGAAACTGTTA
TCCTAGAGATCAAAGCTTTCTTGATTTGAAGAGGTTGTCATTTTACTGCAGGTGATAGAT
ATTTAAGGCCTTATGTGATTCCAGATCCAGAAATGATGTTTGTACCCCGAGCAAAAGAAG
ACGACTGTCTAATTTTAGCAAGTGATGGCCTATGGGATGTCTTGACAAATGAAGAAGCTT
GTGATGTGGCCCGGAGACGAATTCTTCTCTGGCACAAAAAGAATGGTGGTACTTTGAGTA
GCGAAAGGGGTGAAAATGTTGATCCTGCTGCTCAGGATGCTGCAGAGTACTTGACACGAG
TTGCTCTCCAAAGGGGGAGCAGAGATAATATATCTGTGATTGTGGTCGACTTGAAAGCAC
AGAGGAAATTCAAGAAGAAAACGTAGCGCACTAAACCATCCTCGTATTTCATTTTGTGGA
TGTAACATTGGAAACTTATCGTTCAGGATGATAATCAAATCAAATGGTACTCATGTTGCA
GATTTTAGCTTCCTTTTTAATTAGGCTGTTACCGTACATGATGGAAGTTATTCTGACAAT
AAAAATTCAGCAAAGTTGGTTCAAAGAACAAACTACTGACTCCCAGCAGATTATTTATGT
CACTATAGTATAATGTTGTCTCCCAGAACTCTCTCACTGTTTTCTGTTACCATTTCTTGG
CATGATATGTTTTGTTTTCCAC
