Microarray Probes on PGSC0003DMT400045865
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_50339_PI426222305 |
JHI_St_60k_v1 |
ATGAATGAGCAAGCCAAGGAAAAGTATGAAGATGCCAAAGAGAAGGCCTCAGATGCTGCT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400045865
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400045865 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G18340.1 |
+1 |
4e-40 |
150 |
142/418 (34%) |
late embryogenesis abundant domain-containing protein / LEA domain-containing protein | chr2:7969400-7971025 FORWARD LENGTH=456 |
Transcript Sequence (1296 bp)
>PGSC0003DMT400045865 1296 pgsc_dm_v3.4
ATGGGTAGCGGCGATGATGATTATGTGTTCGTGTTGGATGGAGGAGGCAGCGGAGAACGA
ATTTGGCTACCGGAGAGGTATCAAGAAGATGCAGCATCAGATGCTAAGGACACTATAAGT
TCTACCGCATACGGAACCGAAAGAGAGGCGACTCAGAAGGTTAGTGGAATGGTAAACATG
GCATCTGACGCTAAGAATGTTACTTGCGAGAAGGCAAATCAAGCAATGGATGCAGCAGCT
GAAATGGCTCATCGTGCCACCGAGAGAGGGAAACATAGTGCATTCAATGTATATGACTTT
GCATCTGAGAAAGCACGTGATATCGATAATAAAGCGAAAGAGAGAGTTCATTATGCTTAT
GCTTATGACATGGCAGCCAATGCCAAAGAAGGAGCCAAACATAAAGCTTCCGAGGCCTAT
GATTTCGCTGCTAAGAAAGTGGATGATGGAATGAACACAGCTTCCCAAGTGGGCAGGGAA
GTGAAGGATAAAGCTAACCATGCCTATGATTTTGCCACTGACAAAGCAGGTCAAGCCATG
GACAAGGCTTCAGACATGGTAGGTGAGGCCAAGGATCGCGCCAAAGACGCTTATAGATAC
ACATCTGATAAGACGAATCAAGCAAAAGACATGGCTTCTAGTAGTGCAGCTAATGCAAAA
GACACAGTGGAAGATAAAGCATCCGAGGCCAAGGATAGCGCCAACGATGCTTACAGGTAC
ATATCCGATAAGTTGAATCAGGCCAAAGACATGGCATCTAGTAGTGCTGTTAATGCAAAA
GACATAGTGGAAGATAAAGCATCTGAGGCCAAGGACGCTTATAGATACACATCTGATAAG
ATGAATCAAGCAAAAGACATGGCTTCTAGTAGTGCAGCTAATGCAAAAGACACGGTGGAA
GATAAATCATCTGAGGCCAAGGATCGCGCCAAAGACGCTTATAGATACACATCTGATAAG
TTGAATCAGGCCAAAGACATGGCATCTAGTAGTGCTGTTAATGCAAAAGACACGGTGGAA
GGTGAAGTATCGGATGCATACAACCAAACCATAAAAATGACTACTGATAGAAGTACTATT
GATGCAAAAGACTCGACGAGGGATGCATTGGTCCAAGGGAAAGATAAAGTTGATAAATAT
GAAGATGCAAAATCGAAGGTTTATGAAACATATAAATCTGCAAAGGATACTATGAATGAG
CAAGCCAAGGAAAAGTATGAAGATGCCAAAGAGAAGGCCTCAGATGCTGCTGGCAACCTT
GGCCAAAAGATGAGAACTGGAAGTACAGAACTATGA
