Microarray Probes on PGSC0003DMT400045471
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_33501_PI426222305 |
JHI_St_60k_v1 |
CTAAGTACTACTAGTTTGACTATATGAGGTGCCTTTTGACTCTTTATTAGCTTTGTTCCA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400045471
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400045471 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G01470.1 |
+1 |
6e-44 |
158 |
97/244 (40%) |
homeobox 1 | chr3:182648-184034 REVERSE LENGTH=272 |
Transcript Sequence (1508 bp)
>PGSC0003DMT400045471 1508 pgsc_dm_v3.4
ATCTCCTCTTCCCAAGGAAGAATCTCTTTTTCTCTTTCACTTATTTCCTCTTTCATCTAC
TTATTTTCTTCACTCAAATGGCACTGACCCTTCTTCATTGTTCCTTTACTTATGACATAA
CCTTTTTTCAAATTTCAAGATTCATTCAAGAAACCCCATTTCTCACTGCTTAAACAAACC
CCATATAGTTTTTTTCTCAATTCTTGCACCCTAGAAAACTTCAGGGTTGAAAGTAAAAAA
GATATGGAAGTTGGAAGGGTTATTAATGAAAGTTCTAATACTGTTTTGGTTCCAACTGAA
AAACTTTCTCATTGTCTCTGGATGTCCAATTCTTCCCCCTCTTTTCATGGTTCTGCATCA
ATGGTTAATTTCGAAGATGTTGGTCGAGGAGAAGTCACTAAAGAGAGGCCATTTTTCCCT
GCAATTGACAACGAAGAAACTAGCAATGATGATTATGATAGTTGTTATCATCAGCCAGAA
AAGAAGAGAAGACTTTTGCCTAATCAAGTGCAGTTTCTTGAGAAGAGTTTTGAGGTAGAC
AACAAGCTTGAACCAGAGAGGAAAGTTCAATTGGCTAATGAACTTGGCTTGCAGCCTAGG
CAAATTGCTATTTGGTTTCAAAATAGGCGTGCTCGATACAAGACTAAAGTACTTGAGAAG
GACTATGATGTTTTGAAAGCTAGCTTTGATAAACTTAAAGCTGATTATGACACCCTTTTC
AAAGAGAATGAGGATTTGAGAAATGAGGTCCATTTGCTTACACAAAAATTGCATAGGAAG
GAGAAAGGGAAGGAAAACTCAGAACAAAGTGTACCAATTAGTCCAATAGATACACAAGAG
GCTCAAAAGACAACAACTCCAATAGTTGTTACCTCAGATGTACCAAGTATACCAAAGTTA
ATGTGCAAACAAGAAGATGCAACTTCAGCAAAAAGTGATGTTATTGATTCAAATAGCCCA
CATTATACTGATGGGAATCATTCATCAAATGTATTTGAACAAGAGCCATCTGATTTTTCT
CAAGATGAAGATGACAATCTAAGCAAGAGCTTTTTATGTTTCCCAGAAATTGGAGATCAA
ATTCAAGCTAATTCATGCAATTTGAGTTTCCAAATTGAAGATCAGCCTTGTTGGTTCTGG
CAATATTGAGTTATTAGGTTTCAAGATTGGCTCAATCCTACTTTAGTGTTCCAAAGCAAT
CAGTATAATTTCACAAATGGAGTCTGAAGACAATTGTGTGTACACATGCACGTACATAGT
CTTATCTCTATCTTGTGGTACAGGTAGAGAGACTATTTCCGATAGACCCTCGTACGAATT
TAGAGGTCCAAGGCATTTGCTAAATTTCTTTGAACAATAATATGTTGTACATAGGATTAC
TAAGTACTACTAGTTTGACTATATGAGGTGCCTTTTGACTCTTTATTAGCTTTGTTCCAA
AAAAAGTTGTGATTGGCCTTTTTTTTTCACTTTAGCTAAAACACAAATGGTACTATTGCC
TTTTTTTC
