Microarray Probes on PGSC0003DMT400045385
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_43916_PI426222305 |
JHI_St_60k_v1 |
CTGCAAACATCAGGTGAGCTTTTTCCTCTTACAATTGAAATCCCAGGGAAGTGTCTTAAC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400045385
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400045385 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G12130.1 |
+1 |
6e-98 |
298 |
151/185 (82%) |
integral membrane TerC family protein | chr5:3919613-3922154 FORWARD LENGTH=384 |
Transcript Sequence (979 bp)
>PGSC0003DMT400045385 979 pgsc_dm_v3.4
ACCATGTTCATGATGCAAATGTGCGTATTGGGTCTACAGAACCGGGTGCTCTCGTATGGA
ATTGCTGGTGCCATAATCTTCAGGTTGTCTATCATACTGCTAGGAACAGCAACCCTGCAG
AGATTTGAGGCAGTTAACTTACTGTTGGCGGGGATTCTTCTATACTCGTCATTCAAGTTG
TTCACTGGAGAAGAAGAAGATGCTGATCTATCTGACAATTTCATTGTGAAGACCTGCCAG
AAATTCATTCCCATCACATCTGAATATGATGGTGACAGGTTCATAACTTTGCAGGATGGT
GTACGGAAAGCTACCCCTTTACTTCTGACAGTAGCGGTTATTGAACTCAGTGATATTGCA
TTCGCTGTTGATTCTATACCAGCAGTTTTTGGTGTCACAAGAGATCCTTTCATAGTTTTC
ACATCCAATCTCTTTGCAATTTTAGGATTGAGGTCATTGTACACACTCATTTCTGAAAGT
ATGGGGGAGTTGGAATATCTACAGCCTTCCATTGGTGTTGTCCTGGGATTCATTGGATTC
AAAATGATCCTAGACTTTTTCGGTAAGTTTCTGCAAACATCAGGTGAGCTTTTTCCTCTT
ACAATTGAAATCCCAGGGAAGTGTCTTAACTGATATCAAAATTCACGCAGGATACCATGT
TTCCACAGAGGCGTCTCTTGGTGTTGTAGCGACATGTCTAAGCACTGGAGTCTTGCTGAG
TCTTGTAAAGAAATCTGATCAATGAGTTGGGATGCTCTCAAGATCATGTTCTTTAGGAGG
ATAGAGGAGATATCTATGATGTTCCTTTTTTTTTTTCTTCTCTTCGTCGTTGTCTTGAAC
TTGCTCTGCCAAATGTACTTTATTCAATTGATATGACAATGACAAAATTAACAATCTTTT
AGCATGTTTCTTTTTGTAATAATTTGATTTCTTAATGCAACTCAGGTTGGGATGAATTAT
TACAACGATTATCTTCTCC
