Microarray Probes on PGSC0003DMT400045361
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_43924_PI426222305 |
JHI_St_60k_v1 |
CAAGACTAGGCGATGACAGTGTAGCCATTGCTACTGTTAATTAGAAATATGTATAAAGAT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400045361
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400045361 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G37390.1 |
+1 |
4e-16 |
80 |
82/235 (35%) |
Chloroplast-targeted copper chaperone protein | chr2:15694300-15695461 FORWARD LENGTH=259 |
Transcript Sequence (3118 bp)
>PGSC0003DMT400045361 3118 pgsc_dm_v3.4
ATATCTTCCATGTAACAACTCAACTCTTTTTCTTATCCCCTTTTCTCTTAAAACAAAAAA
AAAAACACTTTTCAATCATAAATTCACATAAAGTTTTTTATGCACATTCTCTAAATAAAC
CATTTGGCTTTCAATATTCCCATTATTTCCCTTCACAAAAAAAAAATGAAAGATATGTTC
TGTGCATCCCAAGCTGCTACAGCAATATGTCTTAGCATGGAAGAATTAGGCTCTTCTTCT
TCTTCCTCCTCTGTTATACAACTCGGCGGCGGAAGCATCTCCGGCAGCCGTGCAATTGAT
CGGTACAATCCAATAATCAGAGATTCGCGAAGAACAGGTCCTAAATCCATATCTGCACCT
TGCTCTGCTCGTTCGCCAATTTCTCCGAAAGCACAGAGCAAGAGCAGAAAATCAACTTCG
AAAGAATCGAAGAGATCAAAAGGCGTCTCAAAAAAATTACTGATAGAAAAGGATGATGAG
AAAAGGAAGAGCAGTGTTAGTGAAGGAAATGAGAATATTTTTAAGACGAGTAGTTGGAGC
TGTAAAAAGCCTGGTGAATTTATAACTCCACCTGGTTCATCTAGATATCTTTTGAGTGAG
AAGAATATTTTGGATGCTTTATCAGATTTTGAACCTGTTCTCAAATTGGTTGATTCTAGT
AGTAGTAGCTCTGTACTGGAAGATGTGAAAACAGAGACACATGAATCTTGTCCTCCACCT
TCTGCTTCTGCTAATCAGGTGGTTGTTCTTAGAGTTTCACTTCACTGCAGAGGATGTGAA
AGGAAGATGAGAAAACACATCTCTAGAATGCAAGGTATGTGTGGCTCTCTCTTCTTCTTA
GGGGACCATTCATAATGCCCTCTTTGAAATTTTCTCAATGACTTGTTACGGGTTCAAGCC
GTGGAATCAGTTGATACTGATGTTTGTGTCAAGGTAAGTTTCTTATGTGGTCCTTCCCAA
GACTTTGCTGAACACGGAATGATTCATGCACCAGGCTATCCCTTTTTAAGTTATATTCAT
AAAAAAGATAATTTACATGCTATAACAAGTTAAAATTCATTGATAGTGTGCTAGAGGCTT
AGTTAGCATATAATGTTTATATCATGTAAGACCTTGTTTTAAGAGTCCTCATGACTTTAG
GTAAAGCTCATTGCATATATGACCATGTTTTTGTCTTGGTTTCGCACCCAGTGTTTGGTG
TCCGATACCCACATTGGAACCGATGGTGTGCCATAGGCTTAGTTAGCATGTAGTGTTTAT
ATCATGTAAGACCTTGTTTTAAGAGTCCTCATGACTTTAGGTAAAGCTCATTGCATATAT
GACCATGTTTTTGTCTTGGTTTCGCACCCAGTGTTTGGTGTCCGATACCCACATTGGAAC
CGATGGTGTGCCATAGGCTTAGTTAGCATGTAGTGTTTACATCATGTAAGACCTTGTTTA
AAAGTCCTCATGACTTTAGGTAAAGCTCATTGCATATATGACCATGTTTTTGTCTTGGTT
TCGCACCCGGTGTTTGGTGTCCGATACCCACATTAGAACCCGATTAAATCTGAATTCGCA
TCAGGAAATTCACATTAGGGGGTAAAGCGCTCTCTAACAAAGACGACTTAGGAACTCGAA
CCCGAGACCTCTTGTTAAGGATCAAGGAGTACTTACTACTCCACTTTGGTTATATATGAC
TATGTTGAAGTTAAATTTAACCCAAAATTGTACTATTTTTATGTTATCGCTTGATGCTTA
TCGTAGAAATTTTCTTCTAATTACCTTGTACTGTCGATACATATATATAACTTAAACTCG
TTGATAAATCGTAAACTTTTGATTGGGTATGAGTCAGGTGTGAAATCTTTCAACATAGAT
TTTGCTGCTAAGAAGGTGACAGTAACTGGGGATGTGACACCATTAGGAGTTCTTGCAAGC
ATTTCCAAGGTGAAAAATGCACAGTTATGGACACCAACACTGGCATCGTCTGTCCCTACA
GCCAAAGTTAATTTGAGTAATTCTGAGTTGAATAATGACAAGCAGATGGTGTTGTCTCAT
GAAAAGATAGAAAATGTTACTCCAACTACAACAACAATTCAACTAATGTAAATCAACTTT
TTTTTTTGGTGGTTTAGTAAGACTTTAGAGAAGTGGAATTTTAGTCTGGGATTGGTTTAT
CATCTTCCTGATGGATTTCACTTTCTGGTATTTGTGAACTTCTCAATTTTCATGGAAAAG
TTTTGCTGCCTATTTTAGCATGAAATTTACCGGGTAATTTACAAGAATGATCTTAGAGAT
GGATGGTCTTGAATTTTGATCACGCTTGCTCCAAAAGCAAAACTTCAAGTTTCGACTTTT
AACCTTGAAGTTTTGCCTATGAAGCAAGCGAGGGGTCAAAAATTCAAGATCACTCATTTT
CAAGGTCATTGGGTGAAGTTTCCTGGGTCTAGACATGGTTCCACAAGCTAAACTCGTCGA
CTTTTTTTTTTTTTACCTGTACCCGATATCTACCCCAAACCTTAGCATATTTAATCATGC
CACAAATGCAAGTGAATATATATATATATCACATAACCAAAGTTAATATGCAAGACACGC
AAAGTGCAAGTGTCTTGCATTCATTTTCGTGGAACAAACATTGAGTATGGATATATTTTT
ACCGTAAATTCATCGTTGTTCCAAAATTTCTTCATACAAATAAGGCTGAAAAATGCATCT
TCAGCTGTCAGGAAAGGAAAAGAGGGATGAATCTGCCTCTCTGTGTCAACTAAGCCAGAC
ATATTGAATCAAATATCCAAACTATTCTCAATAGGTTCAAATTTGATGAATCCACAGGTC
CTGCAACATTTACTCTTTAACATTCGTCTTAGTGCCCATATTTGTATCTGCATCAATTTC
AACATATGTGGACTCCATCTCAACTGGATCAAACTAAGTTTGGATCTTATAAACTGGGGG
AAAATCCGCTTTTTAGGTATGTGAGTAACGTCAAGACTAGGCGATGACAGTGTAGCCATT
GCTACTGTTAATTAGAAATATGTATAAAGATTTAAACTATAGCCTGTAATTCTGTGTATT
GAAATTTTTGTGATGGAAAGGATGCATATTTTGTTGTCATACAACTTCATATAAAGGG
