Microarray Probes on PGSC0003DMT400045129
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_24848_PI426222305 |
JHI_St_60k_v1 |
CGCGAAGTCAATTCTAAGCATAACATTGTTACTGAAGAATGAAGTATGTAGTGATTGATC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400045129
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400045129 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G46590.1 |
+1 |
3e-95 |
295 |
152/303 (50%) |
NAC domain containing protein 96 | chr5:18905679-18906811 FORWARD LENGTH=292 |
Transcript Sequence (1620 bp)
>PGSC0003DMT400045129 1620 pgsc_dm_v3.4
GTAACTTTTAACTTGTTTTAGCTTCTTGTTACTCGTAAAAATCAAATCTTTTTGAACATT
TTTTTTCCAAGGAAGATGATCTTGTTGTTCCAAGAATACATTTTGTGGAAATTTATTGTA
AATCTTGAAACAAAGTTCAGTGTTGCAAAAAGCTTTTATTTTTGGATTTTCCAGATTTTC
AACAGATATAGCTGTGGTACTTAAAAGTGGAAAATATTGTCTTGAAAATCTTGTGTTTGC
TCTTGTTTTTTTTTTTTGGGAGAAAATTCTGTTTTGGGATATTGTTACTTCATCATGGCA
GGAACATCACTGCCTCCGGGATTTCGATTTCATCCTACTGATGAGGAATTAGTTGGATAT
TACCTGAAAAGGAAAACTGATGGACTTGAAATTGAATTGGAAGTTATTCCAGTAATTGAC
TTGTACAAATTTGATCCATGGGAACTTCCAGAGAAATCTTTCTTGCCTAAACGTGACTTC
GAGTGGTTTTTCTTCTGTGCTCGGGACAAGAAGTATCCGAATGGGTCAAGAACTAATCGA
GCTACTAAATCTGGATACTGGAAAGCCACAGGGAAAGACAGGAAAGTTGTGTGTCATCCA
GCAGTTGTTGGCTATCGCAAAACATTGGTTTTCTATCGTGGAAGAGCTCCGCTTGGGGAT
AGAACGGATTGGGTAATGCACGAGTATCGTCTTTGTGATGATGTTACTCAGGGTACTCCA
AGTTTTCAGGGGCCTTTTGCACTTTGTCGTGTCATAAAGAGAAACGACGTTTCATTGAAG
ACGAAAGATGTTGGAGGAGTTAAGCAAATTGGATGTACAACAAGTGGAGCATTTACCTCA
GTAAATGCTCTTTCTGATGAAACGCCAACTCAAAGTGCATACATGAGCAACGATAGCAAT
TACTCGACTCCTATTACTTCTCCTTATCAGACAACACAATTTGGGGATTATGAGTCTGCA
ATAGGGGCTAATTCTGCAAACCTCTGGATGTCCTCTGCTATGATTCTTGATTCATCTAAG
GAATGTCCTCAGGGACAGAATGCATCTAATTACTGTCCACAGTATGACTTCCCGAGCATG
ACCCCGTGCCAGCCTAGTGATCAATCTGAGTTCACATCAAATTCAACTTTCCCGAATTTT
AGAGGGGAAGTTGAACTTTCTGGTGACTTAAGTAGCTTTGGCTGCATGTCCCCTTACTCG
ATTCATGGAAGCTACGTGGGGTTTTATGGCAACGAAGACATGACATATGAAGGTTTCAAT
CAGAACAACTCAACCAAGAATCCAAATCTCTTCTGAAGACGAAATGATCATAGGAAGACA
ATATGTTATGGTTTGAAATAACTTAAAGGTTGTTCTCTGAGACAATGGTTTTTATGTTTT
GTCATAAGAGTCATTCGATTTTACAACGTCTCTGAGTCTAGTTCGCGAAGTCAATTCTAA
GCATAACATTGTTACTGAAGAATGAAGTATGTAGTGATTGATCACATTTAAAAATCACAC
TATAGAACATGGTCTATGTTATAACCTAATGTAGCTAAAAAAAAAATGTCTGTAGAAGTA
TAAATTACCAGAATATTTCTAGTAAAAGTAATGTTTGAGTTGCTTTAATTTACAAAGTTG
