Microarray Probes on PGSC0003DMT400044868
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_34279_PI426222305 |
JHI_St_60k_v1 |
TGTGATCTATGTAGGTGAATCTTTTTGGCCAAAGAATATACTTGTAACGCGATTCCATTT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400044868
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400044868 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G13224.2 |
+2 |
3e-75 |
251 |
126/182 (69%) |
RNA-binding (RRM/RBD/RNP motifs) family protein | chr3:4254848-4256621 FORWARD LENGTH=358 |
Transcript Sequence (2501 bp)
>PGSC0003DMT400044868 2501 pgsc_dm_v3.4
TTAAAACACAGCCACGAACCCTAGCTTTCCGTTTACTCTCTCAGATCTGACCAATCCGCA
ATACCCAATCTTAGCCATGGGTTCCAGGAAGAACGATTTCGGCGATGGCGCTAGTCCTGG
AAAAATCTTTATTGGAGGTCTAGCGAAAGAGACGACGCGAGAACAATTTGTGAAGTACTT
TGAGAAGTATGGGGAGATAATAGACTCGGTGATTATGAAAGATAGGCAAACAGGTAGACC
CAGAGGTTTTGGGTTCATCACTTTTGCGGATCCAACAGTTGTAGACACTGTTATAGCTGA
AAACCATATTATCAATGACAAACAAGTTGAGATTAAAAGAACCATCCCAAAAGGATCTGC
TGATTCAAAGGATTTTAAAACAAGGAAGATTTTTGTTGGTGGCATTCCAACTACCATGAC
CGAAGATGAATTCAAGAACTTTTTCTCTAAGTTTGGGAAAGTAACAGAGTATGAGATCAT
ACGAGATCACGTGTCCAAGCGTTCTAGAGGCTTTGGATTTATTGTGTTTGACAATGAAGA
AGTAGTTGATAATTTGCTGGCTGAGGGAAATAGGATGGACATGATGGGTACTCAGGTTGA
GATCAAGAAGGCAGAACCAAAGAAACCCTCAAACCCAGCTTCTGCTCCTGCATATGGTAG
TAATTCTAGGGGGCGTGGATATGGTGATAGTTATGGAGGATTTGCCGATTCATATAGCGG
TTATGACAGTGGAGGTTTTGGCCCTGCTTCTTATAGGTCATTTGGATCTAGGTATGGTGA
CTATGGATATGGTGGTAGATATGGAGACTTTGGCAGTAGTGAATTTGGTGGTTACCGTGG
AGACCCCTCACTTGGTTATTCCAGTCGTTTTGGCTCGTATGCTGGTGGTTATGGTGGGGG
ATACAGTAGCAGTGGGCTAGGAGCATATGGCCGTGGAGGTGGTTATGGTGGCTATGGGGG
AGCTGGCCCTGGTGCTGGTTATGAATCTGGCCCTGGTGCTGCTTACGAATCTGGCACTGG
TGCTGGTTATGGTGGATCAGGAGGTTTATATGGAAGTAGGGGAGGGTATAGTGGCAGTGG
CCGTTACCATCCTTACTCCAGGTAGATTTTCCTAAGCTTTATAGGAGTTGCATTCAGGTA
TCTTGGTTACTGCATCCTCAGGCAAGGGTCGAGTAGATATCTTGGATCACTAGCAAGGAG
ACACCACCTAGAAGATTTGGAGAGCCCTAGTTTGCTACTTCTTATTATGACTGTGCGACC
AGAGAACCATATCTAGATAGATATGATATAGCTTGTGCTTTGTCTTAGTTTAGACATTTT
CTGTTTATGAACTATGGATTAGCTAGAACCTTCTTTCGGAGTATTTTTGTGTGTTTTGTA
TGTTTGGTTTCATAGATACATATGATGCAGGCTCGTATTGTTCTATGCTTAGTAAGTACT
CTACTTCTCAGGTATCACTCTATGATAAGTTCACGAGCTTTTTACTTTTAAGAGATCTAT
GGTGTCTGCTGGTGTCTAGTTATCACTTTGTGTGGTTTAGTTGGCTTAGCTTGGTCGTGC
TCAGTCATATTTGTGGATATTTTAAGTTATTTTCCCTTGTGCCACTTGAGTTTATCAGAA
ATGTGTGCTGAGCCAGATCCCTGAAAGAATTTGATGAGCTAGCTCTCAAGTACTTCTTGA
GTAAATTTAAGAAGTGCTTATAAGCTATGTTGCACGGACTCTTCAAAAATGTCTACATGT
ACGTGTTAGATACTCCAAAAGTAGTGCATTTTGTAGAATCTGACAACAGGTGCGGCAAGA
ATTTTGGAGAGTCCAAGCAACATAGCTTATAAGTACTTGGTTTAAGCTAAAATGCTAAAA
ATATATGAGAAGCCACAAGTTAGAATTTCTTACTTATGACTTTTGGCTTATAAGTAAAAA
ATGAAAAGCAATCCAATTAGGCTTAGTTTTGAAAGGATCTGCATGTCTCGTTTTGACCAT
ACATAGCTTAGGGTGCTTGCATCTCATCTTATTAAAAGTGGTAGTGGAGGGGTGACTACA
GCTTACTGGTTTGTGCAGGAACAACAGTCCTATAGTACTTACTTTCTTTTTGTATTTTCT
TTCATCTTTACTCCGTCACTTAAAATGTTTTGTTTTGGTAATCAAGATCTAATTTGTTTA
TAATCTCTCAGGTTAAAGGCTTAATCTGTGTACATACTCAATTGTAAATGGCTGTAATTC
ATATCTTAATTTGTGTTGAAAATATTGATGATGTAGCTGTAATTCAGCTTATGTTCTTTA
TATTATCATTTAAAAACATGTATTTAAATTGCGTTGATTTGTTTTTGCAAGTACTTTTTA
CCTTTTAAAATCCCAAATACAATCTGGGGCAAATTAGCATCGTTGCTGTTTTATCATCAC
TGATATTAGGTGTTTGATGGAATTGCAAGTTAATTAGTTGGTGTGATCTATGTAGGTGAA
TCTTTTTGGCCAAAGAATATACTTGTAACGCGATTCCATTT
