Microarray Probes on PGSC0003DMT400044438
Probe ID | Chip | Probe Sequence |
---|
CUST_28360_PI426222305 |
JHI_St_60k_v1 |
GGCTAGTATTCTTTGTTTTTCTATACCATATACGACTACGATCAATAAGAGGCACTGATA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400044438
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400044438 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT1G06620.1 |
+1 |
3e-120 |
336 |
167/273 (61%) |
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | chr1:2025618-2027094 FORWARD LENGTH=365 |
Transcript Sequence (1487 bp)
>PGSC0003DMT400044438 1487 pgsc_dm_v3.4
GTGGCCTCAGGAACTCTTGTTCATAACATTCTAACAAAGAAGATGGTACTCTCTAGCACT
GATGATTTTCAGGTCACAGTGGAGAAAAGTTATGACAAAATGAGTGAATTAAAAGCCTTT
GATGATACTAAGGCTGGTGTCAAAGGGCTTGTTGATGCTGGAATCACTAAAATACCTCAA
ATATTCATTCTACCACCAAAAAACAGGCCGGAGTTATCGGATACAAATGAAACACAATTC
ATTTTCCCTGTGATAGATCTTGAAGGCATCGACGAGGACTCAATCAAGCATAAAGAGATC
GCGGACAAAGTTCGAGATGCATCGGAGACATGGGGTTTCTTCCAAGTGGTGAATCATGGG
ATTCCAACATCCGTCCTGGAAGAAATGCTGCAAGGAACACGGCAGTTTTTTGAGCAAGAT
GTCGAGATTAAGAAACAGCATTACAGTAGAGATAGTACGAAAAGAGTGATTCATACTAGC
AATTTTGATTTGTATAGCCCTTCTGTTCCAGCTGCAAATTGGAGAGACACACTTTTCTGT
TTAATGGCTCCTGATCCTCCCAGTCCACAAGAATTGCCAACAGCATGCGGAGAAATACTA
ATGGAGTACTCTAAGGATGTGATGAAATTAGGCTTCTCCTTACTTGAATTATTATCAGAA
GGTCTTGGTCTTGATCGTTGCCATCTCAAAGATATGGATTGTGCGGAGGGGCTAGGTATT
TTGGGACATTACTATCCAGCATGCCCTCAGCCAGAACTCGCGATAGGCACCAACAAACAT
TCTGACAATGATTTTATCACAGTTCTTATACAAGATCATATCGGAGGACTTCAAGTGCTT
CACCAGAATCAGTGGGTTGATGTTCCTCCTACACCTGGTGCTCTTGTTGTGAACATCGGA
GATCTTCTGCAGGCTAGTATTCTTTGTTTTTCTATACCATATACGACTACGATCAATAAG
AGGCACTGATATCATTTGCTTAATTTTTTTGTTGCTTTTTTCAGCTTATATCAAATGACA
AGTACATAAGTGTTGAGCACAGAGTATTGGCAAATAAAGTTGGACCAAGAATATCAGTAG
CATGCTTCTTCTACACAGGTTCAATGCCATCTTCCAAGCTTTATGGACCGATTACTGAAT
TGTTATCGGAAGATAATCCTCCAAAATATCGCGCAACCACAGTGAAAGACTACCGTGACT
ACTTCCGTAAAAAAGGCCTAGATGGAACTTCTACATTGTTGCATTACAGGATCTAATCTT
AATGTAACAGTTCAATTTATGATAAGAACTGAGAACTTTACTTTCGATGCTTGTTTGGAT
GGTTATTACCTATTGTATTGTATCATATTGTTACTTTAAATACAATGTTTGTTTGAATTG
TTACTTAAGTTTTGTTGTATTGCATTGTGTAATCATCGTTATATGATGACCAAATGTCCC
ATTTTATGTAACATGACATACAATTTGGTGTGCTCACGTCATTATCC