Microarray Probes on PGSC0003DMT400044437
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_28270_PI426222305 |
JHI_St_60k_v1 |
TTGTTGTGAACATCGGAGATCTTCTGCAGCTTATATCAAATGACAAGTACATAAGTGTTG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400044437
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400044437 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G06620.1 |
+1 |
2e-153 |
444 |
219/356 (62%) |
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | chr1:2025618-2027094 FORWARD LENGTH=365 |
Transcript Sequence (1395 bp)
>PGSC0003DMT400044437 1395 pgsc_dm_v3.4
GTGGCCTCAGGAACTCTTGTTCATAACATTCTAACAAAGAAGATGGTACTCTCTAGCACT
GATGATTTTCAGGTCACAGTGGAGAAAAGTTATGACAAAATGAGTGAATTAAAAGCCTTT
GATGATACTAAGGCTGGTGTCAAAGGGCTTGTTGATGCTGGAATCACTAAAATACCTCAA
ATATTCATTCTACCACCAAAAAACAGGCCGGAGTTATCGGATACAAATGAAACACAATTC
ATTTTCCCTGTGATAGATCTTGAAGGCATCGACGAGGACTCAATCAAGCATAAAGAGATC
GCGGACAAAGTTCGAGATGCATCGGAGACATGGGGTTTCTTCCAAGTGGTGAATCATGGG
ATTCCAACATCCGTCCTGGAAGAAATGCTGCAAGGAACACGGCAGTTTTTTGAGCAAGAT
GTCGAGATTAAGAAACAGCATTACAGTAGAGATAGTACGAAAAGAGTGATTCATACTAGC
AATTTTGATTTGTATAGCCCTTCTGTTCCAGCTGCAAATTGGAGAGACACACTTTTCTGT
TTAATGGCTCCTGATCCTCCCAGTCCACAAGAATTGCCAACAGCATGCGGAGAAATACTA
ATGGAGTACTCTAAGGATGTGATGAAATTAGGCTTCTCCTTACTTGAATTATTATCAGAA
GGTCTTGGTCTTGATCGTTGCCATCTCAAAGATATGGATTGTGCGGAGGGGCTAGGTATT
TTGGGACATTACTATCCAGCATGCCCTCAGCCAGAACTCGCGATAGGCACCAACAAACAT
TCTGACAATGATTTTATCACAGTTCTTATACAAGATCATATCGGAGGACTTCAAGTGCTT
CACCAGAATCAGTGGGTTGATGTTCCTCCTACACCTGGTGCTCTTGTTGTGAACATCGGA
GATCTTCTGCAGCTTATATCAAATGACAAGTACATAAGTGTTGAGCACAGAGTATTGGCA
AATAAAGTTGGACCAAGAATATCAGTAGCATGCTTCTTCTACACAGGTTCAATGCCATCT
TCCAAGCTTTATGGACCGATTACTGAATTGTTATCGGAAGATAATCCTCCAAAATATCGC
GCAACCACAGTGAAAGACTACCGTGACTACTTCCGTAAAAAAGGCCTAGATGGAACTTCT
ACATTGTTGCATTACAGGATCTAATCTTAATGTAACAGTTCAATTTATGATAAGAACTGA
GAACTTTACTTTCGATGCTTGTTTGGATGGTTATTACCTATTGTATTGTATCATATTGTT
ACTTTAAATACAATGTTTGTTTGAATTGTTACTTAAGTTTTGTTGTATTGCATTGTGTAA
TCATCGTTATATGATGACCAAATGTCCCATTTTATGTAACATGACATACAATTTGGTGTG
CTCACGTCATTATCC
