Microarray Probes on PGSC0003DMT400044212
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_28250_PI426222305 |
JHI_St_60k_v1 |
GGTACAAGTCAAGGATTCTGGTACTAGCAGATATAATGTTGTTTCTGTTCATGTCTTTTT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400044212
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400044212 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G41970.1 |
+2 |
1e-134 |
399 |
201/309 (65%) |
Protein kinase superfamily protein | chr2:17520517-17522304 REVERSE LENGTH=365 |
Transcript Sequence (1584 bp)
>PGSC0003DMT400044212 1584 pgsc_dm_v3.4
CAAATTGCTGTTATATTATTCACCAGTGTAGTTGTTATTTGACTAAAATAAAACATTTCC
CATTGCTTTATTAGTAGTATAAAAGTAAAGAAATTAACTCCAAAAATTGTGAAACAGAAC
AATAATGTCTTCCTCTTCAGAATCAAATCTTGTCAACTATGGCTTCCTTATTATCAGTGC
AATTTTGTCTATCATCTTCATTAGTTCCATCAAATCTATCATCAATGTCATCAAAGATAG
ATTACATCATTCCCATAATCAAGCTAATAAAGAAGGAGAGTCAAATGAATCTCCTCCTCA
AGAAGTTGTACCAATTGATGTACGTGCAGACATGTCCTTGGATGAGATAAATATACTGAC
TGATAACTTCGCGGAGAAAGGTCTTATTGCTGAGGGATCCTATGGCCGCGTTTATGGTGC
TACATTGAGCAATGGACAGCAAGTAGCAATAAAGCAATTGGATACTGATTCTTCTTCAGA
ATCAGATCCTGTCTTCGCAGACCAGGTACAAATGGTGTCAGGACTTAAACATGAGCATTT
TGTGACTCTGTTAGGTTATTGCTTAGAAGCAAATAATCGAATCTTGGTTTACGAGTCTGC
AACCATGGGCACATTGCATGATGTATTACATGGTAAAAAAGGAGTAGAAAATGCTGAGCC
TGGTTTAGTTCTTACCTGGAATCAGAGAGTTAAAATTGCTTGTGGTGTAGCTAGTGGCCT
TGAATATCTACACAAACATGATAAACCAATTATTCATCGCGATGTCAGATCTAGCAATGT
ACTACTGTTTGATGATTTTACCGCGAAAGTTGCTGATTTCGACTTAACAAATCAGTCTTC
AGAGGATTCCACTAGAGTTGAGGAGAGTTATGGTTACCATGGTCCAGAGTATGCCTTGGG
AGAAAAGATAACAGACAGAAGTGATGTTTATAGTTTTGCTGTTGTTCTCTTAGAGCTGTT
GACAGGAAGGAAGGCAGTTGATTATACAATGCCTGAAGGGAAACAAAGTCTTGTTACATG
GGCAACTCCACTATTAAGTGATGATAAAGTTCAAGAGTGTGTTGATCCAAAACTAAATAA
TGAGTACCCTCCAAGGGCAGTTGCTAAGGTGGCAGCTCTTGTAGGACTTTGTATTCAAGA
AGAGCCAGCTTTCAGACCAAACATGTCAATTATGGTCAAGGCACTGCAGCCACTTCTCAA
CGCGGACTAAACCAGGATCAGTGCCTTATTCTACAACATTATTGAAACAAACAGACAGAG
GTGGATTCAGGATTTAAAGTTTATGAATTTCTTATTAACAGATACTGTGGATCCGCCCTC
GCAAGCATGGGCTAACTTTCAATATCAACAAGGTTGTGGTACAAGTCAAGGATTCTGGTA
CTAGCAGATATAATGTTGTTTCTGTTCATGTCTTTTTATACAAGTTGAAACCATTTCAAA
ATTTTGCTGTAACCCAAATTTTTCTTCTTTTTTTTTGTATTATAAGAAAGATACTTGGAC
AAAAGTTTTTTATGTTTTTGCTGAAAAGGATGTTGTACTTCCATTTATTATTTACATAAG
CTGGGAGTTGAAAGTGTGATTACA
