Microarray Probes on PGSC0003DMT400042790
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_36033_PI426222305 |
JHI_St_60k_v1 |
CTGAAAGAGCTGCTAGATTTTCTTGTTTTGCTACAAATTTGGAAAGTGGACAACTTTCAA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400042790
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400042790 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G07340.1 |
+1 |
4e-69 |
235 |
161/353 (46%) |
basic helix-loop-helix (bHLH) DNA-binding superfamily protein | chr3:2341188-2343288 REVERSE LENGTH=456 |
Transcript Sequence (2053 bp)
>PGSC0003DMT400042790 2053 pgsc_dm_v3.4
TCAAACAACAAAGTCATTTTCTTCTAATATTTTGTTACTACTCCAAAAAATATTGTGTCC
ATTTTTTTTCCAAGAAAATTTCTACCCTTTTTTCCTCTTGATTACTTCTTCAATATTAGC
CTTTTGGGTTTGTTTTTTTTCAAAATGGAAAAGGGAAATTTGTTCATAAATGATGATAAC
ACTACCTATGAACATCTTCAAAATTGTTTCTTTAATCCCAATTTAGATAACAATAATTCT
GATCCATTTGAGTCAGCATTAAGTTCAATGGTATCTTCTCCTATTTCAATTCCTAATAAT
AATAGTGGTGGTGATAATTTTGTATTAAGGGAATTAATTGGTAGACTAGGAAGTATTTGT
AACAATAATAATAATAATAGTAGTAGTACTAATAATTCTTGTTATACTACCCCTTTAAAT
TCTCCACCAAAATTGAATCTTTCTATGAGAGGAAATTTACCACCAACACAATTTACTACT
GATCCTGGATTTGCTGAAAGAGCTGCTAGATTTTCTTGTTTTGCTACAAATTTGGAAAGT
GGACAACTTTCAAGTAATCATTCTATCAAGATTCAAGATTTCAAAGATGTCAATTTGGTT
CAAAGAAATTCAGAATTTGGAGATTCAAGAGAAAATTCATCACTTTCTGAGCAAATAATT
GGTCAAAATGATACCAATTCAAGAAAAAGAAAATCAATTTCCAAGGGAAAATCATCCAAG
ATTGTCAATGAGAAAAATGAATCAAATGCCAAAAGAAGCAAGTCTGAGGAAAATGAAAAT
AAAGTAACTAAAGAAGAGGAAAAAGCTGTTTTAGAAGAAAATAAAGATAACCAAAAGGCA
ACAGAGCCACCAAAGGACTATATTCATGTGAGAGCTAGAAGGGGACAGGCCACAGATGCA
CATAGTCTAGCTGAAAGAGTGAGAAGGGAGAAAATTAGTGAAAGAATGAAGCTTTTACAA
GATCTTGTACCAGGCTGCAATAAGGTGACTGGAAAAGCTGTGATGCTTGATGAGATTATT
AACTATGTACAATCACTTCAACGTCAAGTTGAGTTCCTTTCAATGAAATTAGCTACTGTG
AATCCAAGAATGGACTTTAATATGGAAGCACTTCTTTCCAAAGATATGTTTCAATCTAGG
GGATCATTGGCACATAACATGTATCAATCAGAGACATCAACACAAGGATTTCCTTATGGA
TTTCAATCTCAACCAAACCAAAATTATCATAAAGGAACAGAGTTTCCTTTCCCAATTAAC
TCATTGAATCCTAATTTAATCAGAAATTCAAGCATGCAATTGCCTCCTCTAGATGGTTTT
GTTGAACCTACCCCTCAGGTAATAAATCTAATCCTGGTCGTTCGGATTCTTCAAAAATAT
TGTCGTATCTGTGTCGGATCATCTAAATATCGAGGATTAATCTAGGGTGATCCGAGCAGC
ATAGGAATTTATTTAAAAAATTGTAAAATACTAAATGAAAGTTTAATTTGTTTATTTTTA
GGTCCCCACATTCTTTGAGGATGATCTCAATAGTGTTGTTCAAATGGGATTTGGCCAAAA
TCAGAACCAAAGTTTTCACAGTGTAGCAGGCAATGTACCTAATTCTCAAATGAAAGTTGA
ACTATGACCCAAAAAAAGCCTAGTAAAAATTGATGAATAAATTTGAGGCCCCAAAATAAG
AGAGGCTTTGTACATAAAGAGAGAAAATTCACGATTAAGACCTATTCAGAGCAAATATCG
CTATTCAAGAAGAACGAAGAAAGAAGAAATTAAAGAGATATTTTTTCTCTTCAAAATTCT
TGATCTATTTAGTGATTTATTTGGCTGATTCTGATTATTGTTATTATTACTATTTTAATT
ATTTTTCTTTCCTTCATGTAATTCTTACTACAAAAATTGGAGAGGCAATTAGCAAACTCT
ACCAAGATTTGCACTTTGTAAAATATTTTGTAGTCTCATTTGGTAAGAAATTGTGTTGAG
AGGATGGATATGTACTTTCTTAAACACATATTTTCTTACCATTTTAATTTTATCACTAAT
TCATATATTCAAG
