Microarray Probes on PGSC0003DMT400042632
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_31537_PI426222305 |
JHI_St_60k_v1 |
AAGAGGTTTTCTTACCTAGAGAACTTAGGTATGTGTAGAAGTCCAACTGCACGTCACTAA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400042632
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400042632 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G79860.1 |
+1 |
0.0 |
555 |
296/446 (66%) |
RHO guanyl-nucleotide exchange factor 12 | chr1:30042172-30044092 REVERSE LENGTH=515 |
Transcript Sequence (1407 bp)
>PGSC0003DMT400042632 1407 pgsc_dm_v3.4
ATGATTCTTGAAACGAACAATAATTCAATGGCTGGATTCAAGTCACGTTTGGCTAATGAT
TCAACGGTCACTAGCTCTCGTTCAGATATGGAGTTGATGAAGGAAAAGTTTTCAAAGTTG
CTCCTTGGTGAGGATATGTCTGGTGGAGGAAAGGGTGTCTCGTCTGCGCTGGCTTTGTCA
AATGCAATCACAAATCTAGCAGCTTCTGTTTTCGGAGAGATGAAAAGATTAGAGCCAATG
CCAGCTGAGAGAAAAGCAAAATGGAGAAAAGAAATTGGTTGGCTTTTATCTGTCACAGAT
CACATTGTTGAATTTGTTCCTTGTAGACAAGTATCAAAAGCTGGAACAAACATGGAGGTT
ATGGTAACAAAGCAGCGATCTGATCTTCAAATGAACATTCCAGCTCTACGGAAGCTAGAT
GCAATGCTTATTGATTGCTTAGATGGCCTTAACGATCAAAGTGAGTTCTCGTATGTATCA
AAAGATGATGAATCACAGGAAGAAACAAACAGCAGGAAAGATGACAAATGGTGGATACCT
ACTCCTAAGGTTCATCCTAGCGGCTTGTCTGATCCAATGAGGATTTGGCTGCAATTTCAG
AAGGATTCAGTAATCCAAGTTCATAAAGCATCCATGGCGATAAATGCTCAAGTCTTGTCA
GAAATGGAGATCCCAGAAAGTTATATAGAATCCCTACCTAAGAATGGGAGAGCAAGCCTA
GGAGATTCAATCTACAAAAGCATCACCGATGAATACTTTGATCCAGATTACTTCTTCACA
ACTATGGACATGTCTTCAGAACATAAAATTTTAGACCTCAAGGACAGGATTGAGGCTTCT
GTAGTTATTTGGAAAAGAAAGATGAATGCTAAAGATGGGAAATCATCCTGGGGTTCAACT
ATTAGCTTTGAGAAGAGAGAAATGTTTGAAGAAAGAGCAGAAGTCATCTTGTTAATTCTT
AAGCAGCGGTTCCCTGGAATTCCTCAGTCAAAACTAGACATTAGTAAAATCCAATACAAC
AAAGATGTGGGACAAGCTATATTAGAAAGCTATTCAAGAATAATAGAAAGCAGGGCATTC
ACAATCATGTCACGAATTGAAGATGTTCTCCAAGCAGATGCTATTGCCCAAAATCCTTCC
AATGGAGAAGTAAAGAGACCATTATCAGATAAAGAAGTAGGAAAGCTTAACTCTGCTGAG
AATGGAGCTTCATTGACACTTTTAGACTTCATCGGTTGGACACCTGATCAAGAAGACAAC
AACACAAAGAAAGATTTGAAGGAGGATCCAACTTATAAAGATATTAACGCGAAGATTAAA
TGCAACCCTTCTAGCATAGTCACCAACAAGAGGTTTTCTTACCTAGAGAACTTAGGTATG
TGTAGAAGTCCAACTGCACGTCACTAA
