Microarray Probes on PGSC0003DMT400041686
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_26271_PI426222305 |
JHI_St_60k_v1 |
GCAGAGTCCTTGGTATCTGAAAAGAAGTTTTGGCAAGCTTGTATCATTTTTTGTTCTAAA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400041686
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400041686 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT4G39970.1 |
+2 |
7e-151 |
434 |
208/255 (82%) |
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein | chr4:18536678-18538429 REVERSE LENGTH=316 |
Transcript Sequence (1216 bp)
>PGSC0003DMT400041686 1216 pgsc_dm_v3.4
CACAAATCAAATCCCCCGCCAATCGCCATAACCAAAAAAGCTTCACACAAAGCTCCAGTT
TACAGCTACAACAATGGCGTCTTCCATTAACCTACTCATCTCTCCACCAAATTCACAATA
CTCATTCTGTTCTCGCAATTCACTTTTCTTCTCTCCTTCAATTACAACATTTCGACGAAC
TCTTCCTTCGAAATCGTTATCAATTTCAGCTTCTTCTTCTTCGACGAGAGAATTAGAAGC
TTTGATATTCGATTGCGATGGCGTAATTTTGGAATCCGAGCATCTTCATCGCCAAGCGTA
TAACGATGCTTTCTCCCATTTCAATGTGCGATGCCCTGATAATGATGATGAGCCGCTGAA
TTGGAGCCTTGAGTTCTATGATGTGCTACAGAATCAAATTGGAGGTGGAAAACCCAAAAT
GCGATGGTATTTTAAGGAGCATGGTTGGCCTACTTCAACAATCTTTCAGCATTCTCCGGA
GGATGACAACGATAGAGCCAGGCTGATTGATACTCTTCAAGATTGGAAGACTGAGAGGTA
CAAAGAGATAATCAAATCTGGAACTGTTGAGCCGAGACCAGGAGTTTTAAGATTGATGGA
TGAGGCCAAGGCTGCTGGTAAGATGCTCGCTGTCTGCTCTGCTGCAACCAAAAGTTCAGT
TGTACTGTGTCTTGAGAATCTTATAGGACTTGATCGGTTCCATGGTCTTGATTGCTTCCT
TGCAGGTGATGATGTGAAAGAAAAAAAGCCTGATCCTTCAATATACATTACAGCTGCCAA
GAAACTTGGCGTCTCAGAAAGCAATTGTTTGGTGGTAGAGGATAGTGTCATCGGGCTACA
GGCTGCAACCGGAGCTGGAATGTCGTGTGTGATAACCTACACTTCATCTACCGCGGATCA
GGATTTCAAAGAAGCCATAGCTATCTATCCTGACTTGAGTGATGTTAGGTTTAATGATTT
AGAGTCACTTCTTCAAGATGTTGTGGTCGCGAAGTAGGATAGAGGGACGGGTCCATTATA
CATAGAGTTTCGAAGCTGAAACAGCAGAGTCCTTGGTATCTGAAAAGAAGTTTTGGCAAG
CTTGTATCATTTTTTGTTCTAAAATAAATTGTTCATAATTATTCATTTTGTGTAAAATAA
CAGTTAATCACATCACATTCATAGTAATATGTCTATATAATGTAATCTTATTTTTCAGTT
CCAAGCACTGTTGCTT
