Microarray Probes on PGSC0003DMT400038572
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_4930_PI426222305 |
JHI_St_60k_v1 |
GGGTTTCTCTCCTTGGCTTGGAAAGATAATCCCCTTTTGACTGTTTCTTCATGGCACTAA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400038572
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400038572 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G66770.1 |
+1 |
1e-177 |
515 |
278/488 (57%) |
GRAS family transcription factor | chr5:26660723-26662477 FORWARD LENGTH=584 |
Transcript Sequence (1467 bp)
>PGSC0003DMT400038572 1467 pgsc_dm_v3.4
ATGGAGAGCTTGATAGGCGGCGGAGATTCTACCGGAAGCTCTAATCTTCAATCTGGTTGC
GAAGCCTGGCAGACGAGTTCCGAATTCACTACCCTATACGGAGATCCGTTCTCGAGTTGT
CCGAATCGTCTCAGTATCGGTTCTTCTCCTCCGCCTCCGCCTTCTTCCGATCTGAATGGG
GTCATTTTTTCGGAAACCCAGAAAAATCTAAACTCACTACAACCACAGACATCTCCGTGG
GTCGCACCATCTTCATCTCCTCCTCCAATTGTTCAACCCGTGTGTAAAGAATCCAAGGTG
GTATCAGTTGATGTGCTGCCCTGTAGTTCCCCTGAAAGTTTTTCTTCAAAACCATTGTTG
AAATCCTTGGTGGAATGTGCAAGACTCGCTGAATCAGAGCCTGAAAATGTAGTAAAATCT
TTGATTCGACTTAGGGAATCAGTTTCCCAACAAGGAGATCCAATGGAGCGAGTTGGGTTC
TATTTCTTAGAAGCTCTTTACAATGGGCTGTCGTCGTGTCAAGCAGAAAGAACTCCATCA
ATCTTTGGTACTACGCCGGAGGAGCTCACTTTGTCATACAAAGCCTTTAATGATGCATGT
CCCTACTCAAAGTTTGCTCACTTAACGGCTAATCAGGCGATTCTTGAAGCAACTGAAAAA
GCAACGAGGATTCACATTGTAGATTTTGGAATTGTTCATGGTATCCAATGGGCTGCTTTT
TTACAAGCTTTAGCAACTAGATCAGCTGGGAAACCAGTCAGTGTTAGAATCTCTGGTATT
CCATCAGTGGTATTGGGTAACTCTCCGGCAGCTTCACTTTTAGCTACAGGGAATCGTCTT
CGTGACTTTGCGAAGCTTCTGGATCTTAACTTCGAATTCGAACCGATATTGACTCCAGTT
CAGGAACTAAACGGGTCTAGTTTTCGAATTGATCCAGATGAAATCTTAGCTGTGAACTTC
ATGTTGCAGCTGTACAATTTACTGGACGAAACAAATGTTGGTGTAGAAACTGCACTCAGT
CTAGCCAAATCATTGAATCCAAGCATTGTGACATTGGGTGAGTATGAGGTGAATTTGAAC
GATGTAGGATTCCTGCAGCGGTTTAAGAATGCACTGAAATATTACTCAACAGTTTTCGAG
TCGTTGGATCCGAGCTTGACCCGAGACTCCCCGGAGAGAGTACAAGTGGAAAGACTGATA
CTTGGCAGGAGAATTGCCGGAGCGGTGGGCCTAGACGACGGCGGAACCAGAAGAGAATGT
ATGGAAGATAAAGAACATTGGAGAGAATTAATGGAAGGGGCTGGTTTTAAACCAGTAACA
CTTAGCCATTATGCAATGAGTCAAGCAAAAATTCTTCTTTGGAACTATAATTATAGTTCA
TCATTTGGATTAATTGATTCTGCACCTGGGTTTCTCTCCTTGGCTTGGAAAGATAATCCC
CTTTTGACTGTTTCTTCATGGCACTAA
