Microarray Probes on PGSC0003DMT400037473
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_15479_PI426222305 |
JHI_St_60k_v1 |
CTATCATCTTAGAGGGATCTGTTCTTAATTCAAATGGACAACAAGTCTTATGTGATGCAT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400037473
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400037473 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G48600.2 |
+1 |
0.0 |
797 |
385/485 (79%) |
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | chr1:17966074-17969077 FORWARD LENGTH=491 |
Transcript Sequence (1926 bp)
>PGSC0003DMT400037473 1926 pgsc_dm_v3.4
GGCAGCTGATGCAGCAGAAAGGCAGAAGCTTTAACCGTAGATCAAGAACATTTACTAGAT
CTCGCATTGCCGTTGAGGGTTCTTAGTAAACAAACGTATCTACATTGTAATAATATATTA
CTATTATAATTTAAATTTTTTCGTTGTCGTTGATTTCCTCCAATTATGGCTCCTGTTATT
GGTGCTGCTGGTGCTGGTGCTAAATCAGGAGAAGAACGCGATATTCAGAAGAATTATTGG
ATGGAGCATACATCGGAACTTACTGTGGAAGCGATGATGCTTGATTCAAAAGCAGCTGAT
CTTGACAAAGAAGAGAGGCCTGAGGTGCTCTCTCTACTCCCACCATATGAAGGGAAATCA
GTGTTAGAGTTGGGTGCTGGTATTGGCCGTTTCACTAGTGAGTTAGCCAAAAATGCTGGG
CAGCTCATAGCACTGGACTTTATCGATAGTGCAATTAAGAAGAATAAAAGCATCAATAAG
CATCATAAGAATGTCAAGTTTATGTGTGCTGATGTGACTTCTCCAGATTTGAAGTTTTCA
CCTGAATCAGTCGACTTGATATTTTCAAACTGGCTACTGATGTATCTTTCTGATGAAGAG
GTCCAGAGTCTTGTGGAGAGAATGGTAAAATGGTTGAAAGTTGGAGGCTACATATTTTTC
AGAGAGTCATGCTTCCATCAATCAGGAGACCACAAGCGAAAGAACAACCCAACCCATTAT
CGGGAGCCTAGATTTTACACAAAGGTGTTTAAAGAATGTCATATAAATGCTGGTGATGGT
AAATCATTTGAACTTTCTCTCATCGGTTGCAAGTGCATTGGAGCTTATGTTAAAAACAAA
AAGAATCAGAATCAGATTTGTTGGCTATGGCAAAAGGTTAATTCTGAGGATGACAGGGGA
TTCCAGCGTTTCCTGGACAATGTTCAATACAAATGTAGTGGCATACTGCGATATGAACGT
GTCTTTGGAGAAGGTTATGTGAGCACAGGAGGACTTGATACCACAAAAGAATTCGTTTCT
ATGTTGGATCTTCAACCTGGCCAAAAAGTCCTTGATGTTGGCTGTGGAATAGGTGGAGGT
GACTTTTACATGGCTGAGAATTATGATGTTCATGTTGTTGCTATTGACCTCTCGATTAAC
ATGATATCGTTTGCTCTTGAACGTTCAATTGGTCTCAAATGTGCCGTTGAATTTGAGGTT
GCTGATTGTACAAAGAAAACATATCCTGATGGCACATTTGATGTGATTTACAGTCGAGAC
ACTATCCTTCACATCCAAGACAAACCCGCGTTATTCAGATCTTTCTACAGGTGGCTGAAA
CCAGGAGGCAAAGTCCTCATAAGTGATTACTGCAAATGCCCAATACCAGCATCGGACGAG
TTTTCTGAGTATATAAAGCAAAGGGGTTATGATTTACATGATGTTGCAACATATGGCCAG
ATGCTCAAAGATGCCAGTTTTGATGAAGTTATTGCTGAGGATCGAACTGAACAGTTCATT
AATGTTCTCCAAAAGGAGTTGAATACTGTGGAGAAGGAACGCGATTCATTTATCCAAGAA
TTCTCAGAACAAGACTACAATGAAATAGTTGGAGGTTGGAAGGCCAAGCTATTGAGGAGT
TCATCTGGTGAACAGAGGTGGGGTTTGTTCATTGCCAAGAAGAAGTGATTGTCAAAATGC
AGGATGTATCTGGTTTTCGTTTACGTTCTTATGTATCGTATGTTGTTCAGCTTGCCTTGT
AATAATAATGTTCTTACATCTTTATGATGTATGATCAACTGTAAGATTGAATCTTTAGAT
ATAAATCTTCTACTTCTTCTATCATCTTAGAGGGATCTGTTCTTAATTCAAATGGACAAC
AAGTCTTATGTGATGCATATAAATAATGTTCAAAAACTATGTTGTTATTAACAAACCAGG
TTGTCA
