Microarray Probes on PGSC0003DMT400037471
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_15498_PI426222305 |
JHI_St_60k_v1 |
TAGTTTGCTTATTAATATCTCTATTGACAGACTGTATACGATCACGACACATTCAGCATG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400037471
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400037471 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G17980.1 |
+2 |
3e-44 |
156 |
72/94 (77%) |
Calcium-dependent lipid-binding (CaLB domain) family protein | chr3:6152417-6153115 FORWARD LENGTH=177 |
Transcript Sequence (1550 bp)
>PGSC0003DMT400037471 1550 pgsc_dm_v3.4
GAAACTTCATTTTGAATAGCCTATTTCCTCTTGTTTCTCTTCCCTCAAATAACAACAATT
AATAAATAAATATTCATCCTAGCACCCTTCTCTTTCTTTCTTTCTTTCCTATTCCAAAAT
CAGAGCACCCTTGGCCTAATCAACATTCGAAAGAGATCGAGTTTGAGGTGGTTGGAGGGG
TGTTCGTGGAAAACGTTGGAACAAGAGAACCAATAATAAGTTTTGTACGTCCATAACATT
ATTGAATTATCATATATATATGTACACAGGTATTATTTTTGTTTAGTATATAATATAATA
TAAAGGAGGGGATAAAATAAAAAAATGGAGTCATCACCAGGAGGAGGAGGAAGTGCAACG
AAATCATTGATGGACAATCTTTTGGGTCTTTTGAGGATCAAAATAAAGAAAGGAGTTAAC
CTTGCTGTTCGTGATGTACGTACAAGTGATCCTTATTGTGTTGTCAAGATGGGTAAAAAA
CAGAAACTGAAGACACGAGTTATAAAGAAGGATATTAATCCTGAATGGAATGAAGATTTG
ACTCTCTCTGTTTCTGATCCCAGTCTTCCTGTTAAACTGGTAACTTTTCATTCATCAATT
GTATCGAATGCCCGTTATGGTAGAATATTCATGAGGGACTTTCTCAGATTTTACACATTT
GAATATTTTTATGGGATAAGACACAATTCCTTAGACTATGACCGAAATCGCAGAGACACA
CCTTCACTAAACTGAAGCCTACGTGTCCTCCAAACATCTCTCACGCGCCTCTACTAAGTG
GAGTCACGGAGTGTGCCACCTAAGTCTAAAGGTGTACAAAATTACAAAAGAAATGAGTTC
AGCGTAGGTAACTGGACCTTATTTTAGTTAAGATGTGTTTCTAAGATTTCAGTCATAGTC
TAGAGGGTAGTTGTGCTTTATCCCTACTTTTATCGACATATAGTTTGCTTATTAATATCT
CTATTGACAGACTGTATACGATCACGACACATTCAGCATGGATGACAAAATGGGAGATGC
AGAGTTTGACATCAAATCATTTGTAGAGGCACTGAAGATGAACTTACATGGGCTACCATC
TGGCACTGTAATTACAAGAGTACTGCCTTGCAGGACAAACTGTCTTGCTGAAGAGAGTCG
AGTTATTTGGGATGATGGTAAAGTTGTGCAAGATATGATTCTAAGGTTGAGAAATGTTGA
ATGTGGAGAAGTTGAACTACAGCTTCAATGGATTGACCTTCCTGGTAGTAAGATTGGGTA
GAAATTAATCAGGATATTTACTTTACTTGGGACCTGTTTTTTCTGTTCCTATAATTTAAT
GGTTTGTGGGATTTGAAATTGAAGTTTGATATATATAATATAGATCAAGTTTGATGAAGA
CCTTTTCACTCTGCACTTGTATGTGCACAAGGTTTGTAGCTTAGTGGATATGGGGTTTGA
AAGTTTATCTTTTTAGTCATGTTATTCGATGGAATTACTTATGTTATATACTATGTAATA
ATGATGATACCCTTTTCTACAGAAAATTGCATACTTTTTTAAATTTTTTT
