Microarray Probes on PGSC0003DMT400036705
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_6602_PI426222305 |
JHI_St_60k_v1 |
CACAAGAGTCATATATGATACAAAACAATCACAAGTTGGATTTGCAAAAGAAACCTGCAG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400036705
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400036705 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G79720.1 |
+1 |
0.0 |
528 |
263/422 (62%) |
Eukaryotic aspartyl protease family protein | chr1:29997259-29998951 REVERSE LENGTH=484 |
Transcript Sequence (1248 bp)
>PGSC0003DMT400036705 1248 pgsc_dm_v3.4
ATGAAGCATAAAGATTACTGCTTTAGGTCAAGGGGTGACTTGAACAAAAGGCTGCAGAAG
AGATTGCTAGCTGATGATATTCGAGTTCGTTCGATACAATCTAATATCAAGAAAATCAGT
TCTAAGCAAGTTGAGGCTTTATCACAGACTACTACTACTCAAATTCCTATCAATTCAGGT
GTTACAATGCAGACTCTAAATTACATTGTTACTGTGACATTAGGCGGTCGAAATATGACA
GTGATTGTGGATACAGGAAGTGATCTTACTTGGGTTCAATGCCAACCTTGTAGATTGTGT
TATAATCAACCAGAACCACTTTTCAACCCCTCTATTTCCCCTTCTTTTCAAACAGTTGCA
TGCAATTCATCAGCCTGTCTGTCTCTTGAATCTGCAACTGGGAATTCAGGATTGTGTGGG
ACTAATTCACAAACTTGTGGTTACCTTGTAAGTTATGGAGATGGATCGTATACGAAAGGT
GATCTTGGACAGGATCATTTGGTTCTTGGAAGAACATCAGTTGACAATTTTGTTTTTGGG
TGTGGGAGGAATAATAGAGGCTTGTTTGGTTTAGCTTCAGGTCTTATGGGACTTGGAAGG
AGTGATCTTTCTTTAATATCTCAAACTTCTGGTGTATTTGGAGGTGTTTTCTCCTATTGT
TTGCCTTCAACTGAGGCAGAGTCCTCTGGTTCTCTTATATTTGGGGGTGATCCTTCAGTT
TTCAAGAACTCTACACCAATCTCTTACACTAAAATGGTTCCAAATCCACAGCTTTTTAGC
TTCTATTTCCTCAATCTAACTGGAATGACTATTGGTGGGGTTGCTGTTCAAGATTCAAGT
TTTGGGAAAAGTGGATTTCTCATTGATTCGGGCACGGTTATCACAAGGCTCCCTCCTTCC
ATTTACAAAGCTGTCAAGGCTGAGTTCTTGAAACAATTTTCAGGTTACCCTTCAGTACCA
GGTTATTCAATTCTTGACACTTGCTTTGATCTCTCTACATATGAAGAAGTGAACATTCCC
ACCATAAAAGTACATTTCGAGGGCGATGCTCAGATGGAAGTTGATGTTGCTGGGGTTTTC
TATTTTGTGAAGAATGATGCATCTCAGGTCTGTTTAGCACTGGCAAGCCTGCAATATGAA
GGTGAGATTGGAATTATTGGAAATTTTCAGCAGAGAAACACAAGAGTCATATATGATACA
AAACAATCACAAGTTGGATTTGCAAAAGAAACCTGCAGTTTCATGTAG
