Microarray Probes on PGSC0003DMT400035991
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_48598_PI426222305 |
JHI_St_60k_v1 |
AGACCCGCTTTTCCTCGTGGGATCATCAACCATGTTTACTAAGTTGTCAAATGCGGTTGT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400035991
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400035991 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G51460.3 |
+3 |
4e-174 |
509 |
268/413 (65%) |
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein | chr5:20902266-20904292 FORWARD LENGTH=385 |
Transcript Sequence (2337 bp)
>PGSC0003DMT400035991 2337 pgsc_dm_v3.4
TGAGACCTCTCATGTAACCTGTTGTTTTATTCATTCAAAGTTAATCAGAGAATGTATCTG
TTTCATTAATGTTAATAATTGTTTGTTAGTAGTTAGGCCCTTTAATAGGTTCACAGCAAG
TCATGCAGTGTTCCAATTGTATGCTATATGGAATCTACAGAAGCCTTGATTTGTCTTTTT
GTGTATGGTACTGATTGAGATTCTTTAAATTAGAATTCTTTCAAGTCTTGTTCTACTTTG
CTTTTCTTTTTTGGGTGCGACCTTTTCCCTTTTCCTGGTTGTGATTGATCTTATTATGCA
AATTGCTTGATGTTACAAACTTTCTAGACGTTCTGTTGCACTCTAGGTGCTGCATCACTT
TAACCTTTCACCTGTTTATTACATCTCTGTGATATTGAGACATACAGCTTCTTAACATAT
ATCCTTCTGATCCATATTTTGCAGTTTATTGACTGACTAGAAAAGTGAGGCTAAGAAGTG
GGAAGATGTGCAATTTCCAGGGATCTTTTGCTTGATGGACCATACGCCTGGCTGCAGTGA
TAAGGTTACTTTGAAGAAGTGGTTTTTCATTGACAAAAGGGTTGGTTAGAAGTGTGTGAA
ACAATTTAAGAGCAGAGTTACTCAAACCATTGCCAACTGCTTGCATAGTTTTAAAACTTG
TTTTCTGCCATAAAAAGATACTGGGCACAATGGACCTGAAATCAAATACATCCCCTGTTG
TCACCGATCCTGCCCCACTGACTCCGTCCAGATTGGGCATCCACTCAGCTTTGATGCCAT
ACCCTCCGGCTGGGCCAACTTTCTCTCCCACGCTCTTCCTTACTATCCCAAGGAAGAAGC
CTGGAATTCTAGATGATGTTAGATCAAACACTTGGTTGGTGGATGCCATGAAATCTTCAT
CTCCTACACATAGAAAGAAAAGTAAGGATTCCACTGCTGAATTAGCATCAAATGAAAATG
ATCTTGCCTACCGCATATGGATGCTCAAGTATCCGTCGGCACTTTCATCATTTGAGCAAA
TCACAAATTATGCAAAAGGCAAAAGAATAGCACTTTTTCTGGACTATGATGGGACTTTAT
CACCAATTGTAGATGATCCAGATCGAGCTTTCATGTCTAGTGCTATGCGTGCTGCTGTGA
GGAATGTGGCTAAATATTTTCCCACAGCAATTATTAGTGGGAGAAGTCGTGATAAGGTAT
ATGACTTTGTCGGACTATCTGAACTTTACTACGCTGGTAGTCACGGCATGGATATAATGA
GCCCTGTTCGAGCCATTTCTAATGACTATAGTTGTATTAGATCTACTGACAAGCAGGGCA
AGGAAGTTAATCTTTTCCAACCTGCTAGTGAGTTCTTACCAATGATCGAGGAGGTTCTTA
GATCTCTTGTTGAGCTCACAAAAGACATCAGCGGAGCAAAGGTTGAGAACAACAAATTCT
GTGTTTCAGTACACTATCGTAATGTAGATGAGAAGAGTTGGTCAACCATCGGAGAATCTG
TTGATGAATTGTTAAAACACTACCCCCGTCTGCGATTGACACATGGCCGGAAGGTTTTAG
AAGTCAGGCCTGTGCTTAACTGGGACAAAGGGAAAGCTGTTGAGTTCTTACTTGAATCAT
TGGGGTTGAATAATTGTGATGATGTTCTTCCCATTTACATAGGAGATGATCGTACAGATG
AAGATGCATTTAAGGTAAAGTTTAACAGACCCGCTTTTCCTCGTGGGATCATCAACCATG
TTTACTAAGTTGTCAAATGCGGTTGTTAACAGGTGTTGAGAGAGGGAAATAAAGGTTACG
GAATCTTAGTTTCTTCTGCTCCAAAAGAAAGCAATGCATTCTACTCTTTGAGGGATCCAT
CTGAGGTGATGGAATTCCTCAAGTGCTTGGTATCATGGAAGAAGTCAAGTTGTAGCAATT
AACTTATGGAATACATAATACCCCCATTTTGTTGGATTCTTTTCATATGAAGATGGAATG
ACTAGTTGCGGGGATGGTTTAGGGAGCAGAGGTGCTTAGTAAAAGTTTCTAGTGACGAGA
TTCAGGATATTCTAATTTACTGTTTCTTCTCAGAGCTTTTCTTTGTAAATTCATTTTCGT
AATTGCTGCATCAAGGATGCCCTTAGCCCAGCCAATGTATACTCATCGATCTTCATATTT
TGTTTTTTCCTTTTCTTCTTCTCTTTTTTATTTTGTTTTTAACTTTGCCTGCCAGTTCTC
CCCAAGGGAGAGTCTACCTGTTCGACATCTGAATTTCTTTATCTAGTAATTTATGTTCAA
GAGTTATTTTATTGCCCTATTCTATTACACTGCTTTGAAAATTGAATGTAATTTTCC
