Microarray Probes on PGSC0003DMT400035752
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_24460_PI426222305 |
JHI_St_60k_v1 |
GGAGAGGTCATTATTGGTGGACTTGTTACTGCTATTTTTGCTGCTGTTTATTGTTATATT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400035752
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400035752 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G09280.1 |
+1 |
2e-11 |
58 |
37/87 (43%) |
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: root; Has 31 Blast hits to 31 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 31; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr3:2850920-2851258 REVERSE LENGTH=112 |
Transcript Sequence (466 bp)
>PGSC0003DMT400035752 466 pgsc_dm_v3.4
TCATCAAACACCTTGACTACAATTCAAAATCTTTAATTTTTTCTACTAATTTAAAGATTT
TCACTTGTCATGATGGACAAAATAATATCAAGATTTATGTTCTTTTGCTCTGTTTTCATT
TCACTCTTGATTTTCCAAGCAATGGCGGAGAAATCTCAGATTTCTCCGCCATTCCCACGA
AAGCTTACGATTAGAAGAGTGGCAGAGAGTAGCATTGCAAATCCACCATTATCGAAAGGT
AGAATTGCGGAGTTGTTTGAAGAAGGAGAAAATGAAATTGTTGAAGGACCCTCCGGGGTC
GAGGCTTCGGCCCCGGAGGGTACTAATATTCTGAAAAAGAGGCATCATCATTCTGCTGAT
AAGTCTGTTGCTGGAGGAGAGGTCATTATTGGTGGACTTGTTACTGCTATTTTTGCTGCT
GTTTATTGTTATATTCGAATAACTAGAAAGAAAGAAAATATGTAAA
