Microarray Probes on PGSC0003DMT400032516
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_35529_PI426222305 |
JHI_St_60k_v1 |
AAGAAGTACTCCGTAAGAAGCCCAATCGCAGTTGTGCTACAACCTACAATTGGTTTCTAG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400032516
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400032516 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G67360.1 |
+1 |
0.0 |
577 |
335/717 (47%) |
Subtilase family protein | chr5:26872192-26874465 REVERSE LENGTH=757 |
Transcript Sequence (2103 bp)
>PGSC0003DMT400032516 2103 pgsc_dm_v3.4
ATGGATTTGGAGAGCTGGTACAAATCTTTCTTGCCAAAGACCATAGAAACCGCTGACTCA
GAGGAAAAGCCACGGTTGATATATTCATATCATAATGTTATCATAGGCTTTGCTGCTAGA
TTGTCAGCGAAGCAAGTGAAGGAAATGGAGAAGAAACCAGGTTTTATATCTGCGTGGCCT
CAGAGGATATTGTCCTTGCACACTACCCATACTCCGAGTTTTCTTCAATTGCAACAGAAC
GTTGGCTTGTGGAGGGATGACAAATATGGAAAAGGTGTGATCATTGGAGTCTTGGACACC
GGGGTTACCCCTGACCATCCTTCATTTAGCGACGAAGGAATGCCTCCTCCACCTGCTAAA
TGGAAGGGAAAGTGTGATTCGAATTTCACTGCAAAGTGTAACAACAAGCTCATTGGCGCA
AGGTCCTACATAGACGACAAACATTCGCCAATAGATGATGATGGACATGGCACACACACC
TCCAGCACAGCTGCAGGAAATTTTGTGAAAGGTGCCAATGTGTATGGGAACGCTAAAGGC
ACTGCGGTTGGGATTGCCCCTCTTGCTCACTTGGCCATTTATAAGGTCTGTCAAGAATTT
GGTTGCGCCGATGCTGACATTTTAGCTGGCATGGATGAAGCTATTGATGATGGAGTAGAT
ATCCTGTCCCTTTCCCTGGGTGGACCTAGCAGGTCATTCTATGATGATCCAATTGCACTC
GGGGCATACAGTGCCGCAAAAAGAGGTATTCTTGTAAGTTGCTCTGCCAGTAATGATGGT
CCATCCAATGGAATCATATCAAACGAAGCTCCGTGGATTCTGACAGTAGGTGCAAGCACT
ATTGACAGAGAACTTAAGGCCACCGTTATGCTCGGAAACCAAAAACTATTCGTGGGTGAA
TCAGCATTTAGTCCTAAGGTTCCCATTTTGGATTTTTTCCCTTTGATTGATCCTTCACTG
AGTAAACTCAACTTTTATAGCCCTTATTGCGAACCAGGTACTCTGAATGATCCTAAAATT
AAAGGCAAAATTGTTGTGTGCAAGCTTGGGAATGCTGGCAATGTTGAAAAAGGACAAGCT
GTAAAGGATGCCGGAGGAGTTGGTATGATTCTTGTTAGTATCCCTGAGCTTGGTTTCACC
AAGTTAGCCGATCCTCACGTCCTTCCAGCTCTGTTTATTACATTCAATGACGGAACGGAG
ATCCTTCAATACATGAACTCAACATCAGAACCAACTGCAAGAATTTTGTTCCATGGAACA
ATAATCGGAGATAAAGAAGCTCCGGTGGTTGCTGCATATTCTTCTCGCGGACCTAGCAAA
GCTACTCCTGGTATCTTGAAGCCTGATATAATTGGTCCCGGTAATAACATTCTTGCTGCT
TGGCCTACCTCCGTTGACTACGTAAAACACACAAAATCTACCTTCAATATTATACAGGGA
ACCTCCATGTCTTGTCCTCACCTCAGTGGAGTAGCAGCATTGCTTAAAAGCACACACCCC
ACTTGGTCCCCTTCAGCTATCAAATCAGCAATCATGACAACCGCTAACACACTGAACCTC
GCCAATGTTCCCATCTTAGATGAAAGGCTCCTTCCGGCTGACATCTTTGCCATTGGTGCA
GGACATGTCAATCCATCGAGAGCTAATGATCCAGGACTAATCTACGACACCCCATTTGAC
GACTACCTGCCTTACCTGTGCGGTTTGAATTACACAAATCAACAGGTGGGAAGCATCGTG
AAACACAAAGTGGATTGTAAGAAAGTGAAACACATTCCTGAAGCTCAACTAAATTATCCT
TCATTCTCCATCGAATTCGGGGAGAGTTCTCAGACATATACAAGAACAGTGACTAACGTC
GGGGAAGCTAAATCATCTTACACTGTGGAAATAGATTCCCCACCCGGAGTCACTGTGATT
GTTAAGCCCTCTACTCTGAAATTCTCCCAGTTAAACCAGAAGTTGAAATATCAAGTGATG
TTTACCAGAAGAGATAATAGCACAAACAGTGGCATTGCTCAAGGATTCTTGAAATGGAGC
AGTAAGAAGTACTCCGTAAGAAGCCCAATCGCAGTTGTGCTACAACCTACAATTGGTTTC
TAG
