Microarray Probes on PGSC0003DMT400031802
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_10474_PI426222305 |
JHI_St_60k_v1 |
GTGAGAATTCATGGTTGATCCTACCTTGAGACGAGTTGAATGAAAACAACTTTATATTGA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400031802
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400031802 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G52430.1 |
+1 |
2e-79 |
259 |
193/440 (44%) |
hydroxyproline-rich glycoprotein family protein | chr5:21283093-21285045 REVERSE LENGTH=438 |
Transcript Sequence (1731 bp)
>PGSC0003DMT400031802 1731 pgsc_dm_v3.4
GTTTAACAGAAACGAAGATGGGGAGGCTGCTGGAGCATGTATTGGTGTTTTGGCTCTCAG
AAACAGACAAAACGAATTGGACATGCAGTTTTTATTCCAGAAACAACAGCCTCTGGTGCA
GATAGACCTTCTTCTAATACTTCAAGTCAAGCTCCTTCTATAGTGCTTCCCTTCATAGCA
CCCCCTTCATCTCCTGCATCTTTCTTGCCATCAGAACCTCCTTCAGCAACCCATTCACCA
GTTGGCTCAAAATGCCTTTCTATGTCTACATATTCTCCCAGTGGACCTGCCTCAATTTTT
GCTATTGGGCCCTACGCTCATGAAACTCAATTGGTCTCTCCACCTGTATTCTCTGCATTC
ACTACCGAACCATCTACTGCTCCATTTACCCCTCCTCCTGAGTCAGTCCACCTGACTACA
CCCTCATCACCTGAGGTACCATTTGCTAAGCTTCTTGACCCCAACTACCAAAATGTTGCT
GCTGGTCACAGATATCCTTTTGCGCAGTATGAATTTCAATCATACCAACTTCAACCAGGG
AGTCCAGTCAGTAATTTGATCTCGCCTGGGTCAGCCATCTCTGTATCTGGAACTTCATCT
CCTTTTCTTGACCGTGAGTATACTCCTGGACGCCCTCAGTTCCTGAACCTGGAGAAAATA
GCCCCTCACGAATGGGGATCTCGGCAAGGATCTGGGACTTTGACCCCTGAGGCAGTAAAC
CCCAAATATCACGATAATTTCCTTCTCAATTATCAGAACTCTGGTGTTCATCGTCTTCCA
AAGCCCTTTAATGGTTGGAAAAATGATCTAACAGTGGTTGATCATAGAGTTTCTTTCGAG
ATAACTGCAGAAGACGTTGTGAGGTGTGTGGAAAAGAAGCCAACTATGATGATGAGAACT
GGATCAGTGTCTCTCCAGGATACTGAGCGTAGCACTAAACGACAGGAAAACCTGGCTGAA
ATGTCAAATGGACACGATCACGGTGGACATGAGCCTTCCAGAGAAATACACGAGGGATCA
TCTACTGACGGAGAGGATGGACAGAGGCAGCAGAAGCACAGATCCATCACTCTTGGATCG
TCGAAGGAATTCAACTTTGACAATGTAGACGGAGGATATCCTGATAAAGCTACTATTGGC
TCTGACTGGTGGGCCAACGAGAAGGTTCTTGGAAAGGAGCCCTGCAATAACTGGATCTTC
CCTATGATGCAACCCGGTGTCAGCTAACAGGTTTGCATCCCTTTAGTAAATCCACACCAT
ACTAATAAGCTGCTGTTCAGCTGCCTTAATTTTCAATACAACCAGCAGCAAATACCGGAA
ACTCTTGATATCAAAATGTACAAGGACGACGAGGGTGTTGAAGGGAATGATGTGCAGCAG
GACTGATAATAGAAACTGATACGAACGAAGGCTGTTTTTTTGGGGCACTTCCTGAACCTA
GGATAAGATAGATAGGGATGTATTTTAGAAATTACCATATGATAATACTAGTTTTGCTCT
CCCCTCACTGAGAGTTTTTACATTTAACTAATAGTCTACTTTTTCTGCCTTCTAGCACTT
CTATGTATAATAACATAAATAATTTGGTAAAACCAGTGTAGAAGATAATGTTCATTTTGT
TTGATTTTATAATATTGAACTGAGACGAGTTTGAATAGAGCAACATGGAATGTGAGAATT
CATGGTTGATCCTACCTTGAGACGAGTTGAATGAAAACAACTTTATATTGA
