Microarray Probes on PGSC0003DMT400031783
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_10792_PI426222305 |
JHI_St_60k_v1 |
CTATGGAGGGAATAGACTAGCTATAGCTTATCGAGCACAAATTGTTTTTCTGTCTTTTTT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400031783
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400031783 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G63820.1 |
+2 |
7e-49 |
171 |
94/166 (57%) |
CCT motif family protein | chr1:23682529-23684050 REVERSE LENGTH=293 |
Transcript Sequence (1413 bp)
>PGSC0003DMT400031783 1413 pgsc_dm_v3.4
AACAAAAGCAATAGTAAACACAAACTTTTTCCACCTATATTTCATCACTCAATCAGTACC
AAAAAAAATCAGAGAAAAATGAGTTTCTTGTCTTCTTCCTCTCAAAATTCTGATTAAACA
AGACATTTTTGTCCTGTTTTTATTTTCAATAAACAAGAAAAAAATAATCTAGAAATTCAC
TTCAATTTCCTCAATGTCTTCAGAACTTTTTGTATTTGACAACTTTTTTACTGACCCTTT
TTCTCCATCTTTCATAGATAACTCAATTTTCCAAGAAAACAACAATTTCACCATGCCTAC
CAACTGTTTGATACAAGAACTTCCCGAAACCAAAATTGATGAAACAACTTCATTTGACCA
AATCACTTCGACCCTTCTTTCATCTTCACCTCCAAGTCATCAATTTGAGAATCTTTCACT
TTGTCCAATTGGAAATCCAAATTTTGAATTTGGTGATTACTCTGTAAAAGCAGAGGAATT
TCAGGTCCATTTTGAATCTGATCATTTTGGTGCTTTTCAAAATGATGTGAAATTGATGCA
GAGGAGTTTTAGTAGTAATTGTTTTGATAATAATAATAATAATAATAATGAGAAACAAAG
TTTCTCTATTTTTACACCAAACTTTGATAGTTTAATTGAGTCTACAAATTTTCAAACATC
AGCAGCAGTTAGTTCACCTGAAAACAGCTTTTCTTCTGGCCAAATGAGAAGAGTTTGCAG
CACTGGTGATTTGCAAAAGATGAAGACAAGTCAAACAAGGAACACTTTATCAACAAGTCC
ATTATCAGGAGAAAGAACATTTATTGAAGAAGCATCAAATATCAAAGTGGGAAGATATAC
TGCAGAAGAGAGAAAAGAAAGAATTCATAGATACAGAGCAAAAAGAACTCAAAGAAATTT
TAACAAAACAATTAAGTATGCATGTCGAAAAACACTAGCGGACAATCGTCCAAGGGTTCG
TGGCAGATTTGCTCGTAATGATGAAGTTGGTCTTGAGATTCCGAAAACTTCATCATCAAC
ATTGTTTAATCGATATGAAGATGAAGATGATATTTGGATTGAGGGAGTTCATGAAGAGGA
AGAAGATCATCAAGGCTCAATAGGGAGAAGACAATTGTATCACAACTTTGGTTCAATGAC
ACAATATCATCAACAATATTCAAGCCACTAAATTGGGTCATAATTAGAGATTAATTTTTA
TAATTAAGTCATTAAAGTTTGGATTAATTAACCATGATTAATAGAAGATATTAGCTATGG
TTTAATTTATGAATAAATTAATTAGGTGCACTTGCAAGTGCAACAATTTAAATGTCTATG
GAGGGAATAGACTAGCTATAGCTTATCGAGCACAAATTGTTTTTCTGTCTTTTTTATTTT
TTTTATTTAGGAGCTTATTAGTTATTATTAAGA
