Microarray Probes on PGSC0003DMT400031707
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_10601_PI426222305 |
JHI_St_60k_v1 |
AATGGGGGTATGTTGTCTTGCACGAAGAGGGATATCTATGAATTGTCATGTACGAGCCAG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400031707
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400031707 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G64200.1 |
+2 |
7e-112 |
332 |
182/234 (78%) |
vacuolar H+-ATPase subunit E isoform 3 | chr1:23828537-23830002 REVERSE LENGTH=237 |
Transcript Sequence (1255 bp)
>PGSC0003DMT400031707 1255 pgsc_dm_v3.4
GTTGCTGGCATATAGCGGCCTATAAAAATCGGAGACGTGACTCATGTGAAGTCACCAGAG
AACCAATAAAACTACTACTACTCCACAAATTCTCTCTTACTAGTTTCTCATTTCGCTAAT
ATCAGAATCCACATTTCTTCTCCGATCCAAATTTACGAAGATGAACGATGCAGATGTATC
AAAGCAGATCCAGCAGATGGTCAGATTCATCCGTCAGGAAGCTGAAGAAAAAGCTAATGA
GATCTCCGTCTCCGCCGAAGAAGAATTCAACATTGAGAAGCTGCAGCTAGTGGAAGCAGA
GAAGAAGAAGATCAGACAGGAATACGAGCGTAAGGAGAAACAAGTTGATGTTCGCAAGAA
AATTGAGTACTCCATGCAACTCAATGCCTCTCGAATCAAGGTTCTTCAAGCTCAGGATGA
CTTGGTCTGCTCCATGAAGGAGGCAGCATCAAAGGAACTTTTAAATGTCAGCCATCACCA
CAACCACCATATCTATAAGAAGCTTCTGCAAGCTCTTATTGTTCAGAGTTTGCTCAGACT
TAAAGAGCCTTCTGTCCTACTACGTTGCCGGGAAGATGATGTTTCCTTGGTTGAAGATGT
CTTGGATGCTGCAAAGGAAGAGTATGCAGAGAAGTCTCAAGTTCACGCACCTGAGGTCAT
AGTTGACCAGATCTACCTTCCACCAGCTCCATCACATCACAATGCTCATGGCCCTTCCTG
TTCTGGAGGAGTAGTTTTGGCTTCTCGAGATGGGAAAATTGTATGTGAAAATACACTTGA
CGCCAGATTAGAAGTTGTGTTCCGTAAGAAGCTACCAGAGATTCGCAAGTGTCTGTTCGG
TCAAGTTGCTGTCTAGTACATGAGAAGCATTAGACTCTTGGGACTCTTGGGATTCTGAAA
ATGGCACCTGCTCGTATACTATTTCCTTTTTTCTCTGCCCAGTTGTGCTTATATACTATT
ATACACTGTGTCGGACTCATGTTAAAGGGATATTTTCTTCAACATTTTAGCATTAAGCAC
ATGCATTATATTTTCGTTTACAATGTTGAACAACAAGTGCAAGTTACTGGAACCCTAAGC
TTGCTGGGTCGAGAGAATAAAATTATTCGGAGTTGATGGCTCTCCATACTTTATTAATGG
AAGTATTTGTATCTCTAAGTCAGCGCTTTATGCTTATATTAGTACTTAATTTATAATGGG
GGTATGTTGTCTTGCACGAAGAGGGATATCTATGAATTGTCATGTACGAGCCAGC
