Microarray Probes on PGSC0003DMT400031650
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_10549_PI426222305 |
JHI_St_60k_v1 |
CCTAGTTTTGTTGCATTTCTTGGAATTTGTAAGGCACACAAAAGTGTTGCATATTAGAGT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400031650
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400031650 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT4G24015.1 |
+1 |
3e-37 |
134 |
96/154 (62%) |
RING/U-box superfamily protein | chr4:12469887-12471197 REVERSE LENGTH=174 |
Transcript Sequence (1010 bp)
>PGSC0003DMT400031650 1010 pgsc_dm_v3.4
TTTTAAGTGTCTACTTAAAAAAATAATTCAATGGGGGTACCTGAATCTCCTAGTCCACCT
CATTTGTATCCTCAAGCACTTCAACTTAAACTTTATCAAGCTTTCATTTTTTCAATTCCA
ATACTTTTTTCTATAATCTTGTTTCTTTTGTTTTACTTGTTTTATCTCAAAAGAAGAGCT
TCTATTGGTTCTAATTCCCCTCTTGTTATACTTCCAAGAAGTTCAAATCAAGTTATTATT
CATGGTAACGTAGATGTAAAGGGGATGCTCAAGACTTATAAGCTTCCTGTTATACTATTT
GATGAAGATTCAATGATGAAGGATTCTCAGTGTTGTGTTTGTTTGGGAGAATTTGAGATC
AAAGAGGAGTTACACCAACTACCTTCTTGTAAGCACATTTTTCATGTTGAATGCATACGC
CATTGGCTTCGTTCAAATTTCTCTTGTCCACTCTGTCGATGCCATGTCCTTGTTACCAAC
AAAAAACCGCAACCTCCACAACAACCACCTTCTAATAACAACCCTTCGAGTGTCATCGAG
GAGGAGAGGGAACACCACGATATAACGGTTAGTAGAGAGGAGCATGAGCAACATGTGGTG
GTGATAGTTGAAGAATTGTCTAGTGCTAGTAGCTCATCATCTAGCATTGTTGACAATATT
GAGAGAGATTTTTCAAATGTAGAAACTCATGTTATCAACATTGATAAGGCTCCTGACACA
TGAATGTCAATCGCAGATAAAATTGAAATGATACAGAGAAGATCTGTGTGGTCCCTGCAC
AAAGATGACTCACACAAATCGAGAAATGATCCAAGTTTTCCTTTTAAAGAAAAGGAGAAT
TTGAAGGACTGCCTAGTTTTGTTGCATTTCTTGGAATTTGTAAGGCACACAAAAGTGTTG
CATATTAGAGTATATAGTTTATAGATACAACTTTAGAATGACATTAAATATGACAATCTT
TTTTTAGTTTTGATAAGACATATGACCGAAAGAATGAAATTGAAATTTTG
