Microarray Probes on PGSC0003DMT400031580
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_10867_PI426222305 |
JHI_St_60k_v1 |
GCAGTAAAATATCCTGGATCAGTCAAATCCCTCACTTTAATTGCACCGGTTTCCGAAGAA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400031580
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400031580 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G41900.1 |
+1 |
2e-79 |
253 |
145/282 (51%) |
alpha/beta-Hydrolases superfamily protein | chr5:16769032-16771567 FORWARD LENGTH=471 |
Transcript Sequence (981 bp)
>PGSC0003DMT400031580 981 pgsc_dm_v3.4
ATGGCGGCGATTAAAGAAAATGCAAGATCAAGCCTCATAGTAGCAGGCAGAGTAATGAAC
GAAGCCATTAGCTTCCTAGTTTTCATTATCCTCGACATTCTTGATTTTATCCTCTGTTAT
ACTTACAAAGTAATCGATTTCATAATCGAAGCAGAGTGGAAACCCTGTTATTGCTCTTCC
ATTAAAGAAGTCATAACGAGCAGCGGCTCAATCTTGGTCTCCGAACGAGGAGAGTCCAAG
ATAGTGTGTCTGACTTCTTCGAGTAAACTACATCTCGAAGAAATTTCAGACACACTTTAC
ACTCGGCCATCATTGATGGCGGAGGTGTCAAAATTGACAGTGAAACGCCGGAAATTTGAC
AATGCGGGTGTGATACAACAGTCATGTGAGAGGTTGAAAAATGGAAGTGTCCGTTCAACT
TTTACTGTTAATTCCACCATAGTGGAAATGCTCCAAGGCAAAATGGGTGGCCAGAAATCT
CATGATGTTACTCCTAGGTGGTCGGATTGTGATTGCAACACTTGTAATTCTTGGTCCTCT
TCTTGCAAAGATTCACTTTTTGTCCGAGTTGATGGTGCCAAAGAGACATTATTTCCAAAC
TTTTCAAAGGCAGCAAAATCAAAGTATCGTTTATTTGCAGTGGATCTGTTAGGATTTGGA
AGGAGTCCAAAGCCAAGTGATTCACTTTACACAATAAGAGAACATCTAGAGATGATTGAG
AAATCAGTTTTAGAGGCACACAAAGTGAAATCTTTCCACATTGTGGCACATTCTTTAGGT
TGTATTTTGGCTCTAGCACTAGCAGTAAAATATCCTGGATCAGTCAAATCCCTCACTTTA
ATTGCACCGGTTTCCGAAGAAAGGGATGAAAACACATTAGCTTTTAAACCTGAGTTTGGT
GTGCCTTTAAGAGCCGAGAACTTTCTTTCTGAGGCTGATCTTTCGGCTGGGGTTAGGGAC
CAAATAGCTTTATCTGATTAA
