Microarray Probes on PGSC0003DMT400030306
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_39970_PI426222305 |
JHI_St_60k_v1 |
CCTGAGGGAACTTTTGATACCCAAAATGTTTCTTGCGTATTGAACATAAGTAAGAAATTC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400030306
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400030306 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G72660.1 |
+2 |
0.0 |
708 |
360/399 (90%) |
P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr1:27354161-27356543 FORWARD LENGTH=399 |
Transcript Sequence (1899 bp)
>PGSC0003DMT400030306 1899 pgsc_dm_v3.4
CATTTTGATCCCACCTTATTTGCACCACCCTTGTTTCTCCCTTCTTCTAGTCGAGACTTG
AGTGCATACACTATCTTCTACTTACACACGAGCCGCCGCATATAGTCGCCGGTACGGTCG
CCGGTGTTTACAATATCTTCTCGTCGTTCAGGAAAACTAAGGAACCATGGGGATCGTAGA
AAGGATTAAAGAAATAGAAGCTGAGATGGCTCGTACACAAAAGAATAAAGCAACTGAGTA
TCATCTTGGTCAGCTGAAGGCTAAGATAGCAAAGCTGAGGACACAACTGCTGGAGCCCCC
TAAAGGTTCCAGTGGAGCTGGAGAGGGGTTTGAAGTCACAAAGTATGGCCATGGACGTGT
TGCACTAATAGGATTTCCAAGTGTTGGAAAGTCAACACTACTAACGATGCTGACTGGAAC
ACATTCTGAAGCTGCATCATATGAGTTCACTACACTTACTTGCATTCCTGGTATTATACA
CTACAATGATACCAAAATTCAATTGCTTGATCTTCCGGGTATCATTGAGGGTGCATCAGA
AGGCAAGGGGCGTGGTAGGCAGGTCATTGCTGTTTCCAAGTCATCAGACATTGTTTTGAT
GGTTCTGGATGCTTCAAAAAGTGAAGGCCATCGACAAATTTTAACAAGGGAGCTGGAAGC
TGTGGGACTGCGATTAAATAAACGACCTCCTCAGATATACTTCAAGAAGAAAAAGACGGG
AGGGATTTCTTTCAACAGCACGTTGCATCTGACACATATTGATGAGAAGCTCTGCTATCA
AATTCTTCATGAATACAAGATTCACAATGCTGAGGTTTTATTTCGTGAAGATGCTACAGT
GGATGACCTTATTGATGTTATTGAGGGAAATCGTAAATACATGAAGTGTATATATGTCTA
CAACAAGATAGATGTTGTCGGTATTGATGATGTGGACAGATTATCCCGACAGCCAAACTC
CATTGTCATTAGCTGCAACTTGAAGCTGAATCTGGACAGACTACTTGCAAAAATGTGGGA
AGCAATGGGTCTTGTCAGAGTTTATACAAAGCCTCAAGGCCAGCAACCAGATTTCGCCGA
GCCTGTGGTTCTCTCTTCTGATAGAGGTGGCTGTACTGTAGAAGATTTCTGTAATCACAT
ACATAGGAGCCTTGTTAAGGATGTGAAGTATGTTTTGGTATGGGGCACGAGTGCAAGGCA
CTACCCTCAGCATTGTGGTCTCAGTCATCCGCTTCAGGATGAAGACGTGGTTCAGATTGT
CAAGAAAAAGGAGAGGGAAGATGGTGGAGGCAGAGGCCGATTTAAGTCACATTCTAATGC
TCCTGTTCGGATATCTGACAGAGAGAAAAAGGCTCCACTGAAGACATAGTTTAATCAGAA
GGTGAAGCTTTTATTTATGTGCTAATCGTTGAGACATCAATTTTTGATCGGAGAGTATAT
TGCAGGAAAGTAATGAGCTATTCTAGAGGTTTCTTCAGCTCTAAGGTGTGAAGCTAATCA
TAATTATGATATCAACACTATGCAGTGTAAAAAAATATGGACATATGCCTTCCCTCCGAA
GGGTAAGGTCTGTGTAGATCCTATCCTACCCAGACCCCACTTGTGGGATTGCACTGGGTA
TGCTGTTGTTGCCTTCCCTCCGAAGGCAAGATGTGCTGTTTAGAGTTTCCATCTGTAACC
CGTTATTGGTAACTTTAGATGTCAGCTTCCAACTGGCAGTACGTCTTTGTGAGAACTAAT
GTGTGGCTGAAATGGTAGAGGCCTGAGGGAACTTTTGATACCCAAAATGTTTCTTGCGTA
TTGAACATAAGTAAGAAATTCACTTATTTTCCTTAAAAAAAAATTCCAAGCTTTCATACT
GAACACACCCTTAGTTTTAACAGTGAAATTTTAGTCATG
