Microarray Probes on PGSC0003DMT400030112
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_8392_PI426222305 |
JHI_St_60k_v1 |
CCATTCTCATTGAAATACAGGCAAGAATTTTCGTATACGTATGTTGCACGTGTATATCAA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400030112
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400030112 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G49630.1 |
+1 |
7e-126 |
374 |
194/259 (75%) |
amino acid permease 6 | chr5:20142681-20146441 REVERSE LENGTH=481 |
Transcript Sequence (1045 bp)
>PGSC0003DMT400030112 1045 pgsc_dm_v3.4
CATTTTTTAATTTCTACACTTATATATATGTTCGTATTTGTCCCCTCTTTTATCTTCTTT
TCATAAACCTCTCTCCATCTTCTTCTTAACTCCAAACACCACACAATATAACAAAACTCT
TAAAAAAAAATTATGGCATCAGAATTTGAGAAGAATAGTACCAATATGTATGTAGAACAA
TCACCAAAAGGACTAGAAAATGGACAAGTTCAGAAAAATGTTGATGATGATGGACGCGAA
AAAAGAACAGGGACCGTGCTAACGGCGAGTGCTCATATAATAACTGCAGTGATTGGGTCA
GGAGTGTTGTCACTAGCATGGGCAATGGCTCAGCTAGGGTGGGTGGCTGGTCCTGTTATT
CTCTTCCTCTTTTCTTTCATCACCTATTTTACTTCAACATTGCTCGCCGATTGTTATCGA
TTTCCGGGCCCCGGCTCCGGCAAGAGAAACTATAGTTACATGGAGGTTGTCCGCTCTCAC
TTAGGAGGATTTAAAGTGCAACTTTGTGGAATAGCTCAATATGGTAATTTAGTAGGAATT
ACAATTGGATACACAATTACTGCATCTATTAGTATGAAGGCAGTAGTAAGGTCAAATTGT
TTTCACAAGGAGGGGCACCAAGCTAGTTGCACAGTATCAAATTACCCATATATGGTTATT
TTTGCAATAATACAAATAATTCTAAGCCAAATACAAAATTTCCATAAACTTTCATGGCTA
TCAATTCTTGCAGCAGTTATGTCTTTTGCTTACTCTCTTATTGGTCTTGGACTTTCCATA
GCCAAAGTTGCTGGTGCTGGGCATCATGTGAAGACTAGCCTAACAGGGACAATAGTTGGT
GTAGACGTGTCAGGATCTCAGAAAGTTTGGAGATGTTTACAATCTATTGGAGATATTGCC
TTTGCTTATGCTTTTGCCACCATTCTCATTGAAATACAGGCAAGAATTTTCGTATACGTA
TGTTGCACGTGTATATCAAAATATCACTTATATATCTCTATTATATAAGTGATATATTTG
AGATTATGTCGGTTTAAACTTTTTT
