Microarray Probes on PGSC0003DMT400029751
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_41497_PI426222305 |
JHI_St_60k_v1 |
GAGTTGTAAAGCTGCTGTGAACTCCTCAAAAAGCTCTCTCTTCTCTCTTTCTTTCTTTCT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400029751
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400029751 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G42200.1 |
+2 |
1e-52 |
187 |
139/375 (37%) |
squamosa promoter binding protein-like 9 | chr2:17587601-17589451 FORWARD LENGTH=375 |
Transcript Sequence (1914 bp)
>PGSC0003DMT400029751 1914 pgsc_dm_v3.4
ACCAGATATCGAACACAGAATGGAAAAATGATGTGCAAAGTGAGGAAGAATGAAGATGAA
GAAGCAAAGATTAGAAAATTGTGTGTTTTTATAACATGGCAGTTGGGAGTTAGTGACCCC
AAAAAGCATCAAGAGTTGTAAAGCTGCTGTGAACTCCTCAAAAAGCTCTCTCTTCTCTCT
TTCTTTCTTTCTTTTCTTTGCTCTGCTCTCACCTCCATTATTTGACAGTCTCTTCAGAGC
AAATGGGGTACCTGCACAACCTCCCAAGCTGGCATCATGGCCCATTGTCAGGTGTCTACT
TTTCACAATGCCCCAAACAAACAAAGCAAAAAATGAAAATCTCACTACTACCCTTTCTTT
CTCCTACTTTCTTTACTACCTCTATATACTCAAAAATGCACAAAATTTAACAATACCCAT
ATCGAGATAACCCCAAAATATACAAATAAAGAAAAAAAAACTGATCTTTTTCACAAATAT
CTTGTTTTTTCCTTCATATGGGTACAGTTTGTATTATGATTTTGAACCTATAATGGAACT
GGGTTCAGTTTCTTCTTCTGGTAATTCAAGCTCATCTGATTCTTTGAATGGTTTGAAGTT
TGGCAAGAAAATCTACTTTGGAAATGTGGGTGTTGGAGTTCAGGTCAAGAATGGAAGTGG
GTCGTCGCCGGTGACCGGAGATGGGAACATGCCACCGGCTCCGGCGACGACTAAGAGGGG
GAGGGGTGGGTTGGTGCAGGGTGGTCATCCACCTAGGTGTCAAGTTGAAGGTTGTCAGGC
AGATCTGAGTGATGCTAAGGCTTACTATTCAAGGCATAAAGTTTGTGGTATGCACTCTAA
GTCTCCTACTGTTGTTGTTGCTGGTCTTGAACAGAGGTTTTGCCAACAGTGTAGCAGGTT
CCATCAATTAACTGAATTCGACCAGGGGAAAAGGAGTTGCCGCAGGAGACTGGCATGCCA
TAATGAGCGTCGTAGGAAGCCTCCATCTGGATCTCTTTTCTCTACACACTATGGGAATCT
TTCTTCATCAATATTTGAAAATAATAGCAGCAGATCCGGAAGCTTTCTGGTCGACTTCAG
CTCACACCAAAATGTCAATGATAGTTCATGGCCAAATACTCGAGCATCTGAACAAGGATG
GGATCATCAATCATCAGGAAAGTTCCTTCAACGTCCTTGGCTGAATAACTCTGAAAATGC
TGCCAGTGAGCTTGTTTTGCAAGGTTCAGCTACCAGGACCAGTTATCCTAGTGTTCCTTC
TGGAGACTATTTTCCTGGAGTCTCAGATTCAAGTGGTGCTCTCTCTCTTCTGTCAAATCG
GTCCTGGGGATCAAGGAATCGATCCCCAAGTCTTGGGGTTAACAGCCAAGTTCACATTGA
TGGGGTACACACCATTCAACCTTCAGGTTCTCATGGTGCACCTACCAATCACTTCTCAAG
CCCTTCATTGAGTTTTAAAGGAAATGAAGCTAGCAGCAGTTCACATGAGATGCCTCCTGA
TCTCGGTTTGGGTCAAATGTTACAAGCTTCTGATAATCCATACTGTGGCGAGCTTGGGAT
GGCTCAGCATGGTGATGGACGACAATACATGGAACTGGACCAGTCCAAGGGTTATCATCC
TTCTGTTCAGAATGTGCACTGGACTCTTTGATTGTCCTCTCCTTCGTTTATGATCACGAT
TGTAAGACTATTTTGTTCATTATCTAGTTTGATATCTTAAAAGGCTGTCTGTTGACAAAT
GACCTTTACTATTATGCCAACTACTGTGCATTTCTGTTGGGCTAGACCCCAGATGCCTAT
CGTTTTCTTCTTGAACTTTTTGATGACTTGCTTCGGTTTTTTCCTCTTGCTAAATGATAT
TCAAGGGGTTAAATGAAGTTTGAACATTTATCAATAAATATGCTTCATTATGAT
