Microarray Probes on PGSC0003DMT400028828
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_2523_PI426222305 |
JHI_St_60k_v1 |
TTTCTTTCTTCATTATCTTCCCGAAGCGTTAAGGGATGAGAACAAATGGCCCCGTCTTCC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400028828
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400028828 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G55970.1 |
+3 |
3e-147 |
426 |
209/366 (57%) |
jasmonate-regulated gene 21 | chr3:20766970-20769264 REVERSE LENGTH=363 |
Transcript Sequence (1182 bp)
>PGSC0003DMT400028828 1182 pgsc_dm_v3.4
CACACACACAAAAAAAGAACTCTTTATTTTTTTCCTTTATATTGGTTCTTGTTCAATACT
AAAAAAATTTAATTATGAGTTTTTTACAAAGTTGGCCTGAGCCAATTGTCCGTGTTCAAT
CTCTGTCCGAAAGTGGCATTCGAAAAATTCCCGATCGTTTCGTAAAGCTGCCTTCGGACA
GATCATTTAACATCACGGACACAAAAACAACGTCAATTAACGTACCGTTAATTGACCTAG
AAAACCTTAATTCCCCGAACGAGTTTGTTCGCAAGGAAACAATTGACGGCATTTCCAATA
CGTGTAGGGAGTGGGGTTTCTTTCAAGTGGCTAACCATGGGGTTAGCCACGAGCTGATGG
AAAAAACTCGTACTATTTGGCACGAGTTTTTTCAGCTTTCACTTGAGGAGAAGCAAAAGT
TTGCAAATTCGCCCGTGACTTATGAAGGATACGGGAGCCGTATTGGTACGGAGGTTGGTG
CTAAATTGGATTGGTGTGATTATTTCTTTCTTCATTATCTTCCCGAAGCGTTAAGGGATG
AGAACAAATGGCCCCGTCTTCCGGTTTCATGCAGGAAATTGGTCTCGGAATATGGTCAAG
AATTAGTGAAATTAAGCAAAAGGTTAACTACGATTTTATCGATAGGCCTTGGATTAAATG
AGGATTATATACACCAAAGTTTTGGAGGAAATAATGAAACTAGTGCATGCTTAAGGGCAA
ATTTTTACCCAAAATGTCCTCAGCCGGACCTTACACACGGCCTCTCTCCTCACTCGGACC
CTGGCGGAATCACCCTTCTCCTCCCTGACACTGATATCCCCGGCCTCCAAATCCGTCGTG
GCAATAACTGGTTAACTGTTAATCCGATTCCCAATGCATTTATTGTCAATATCGGAGATC
AAGTTCAGGTGTTGAGCAATGCAATATACAAGAGTGTGGAGCACAGAGTGATCGTTAATT
CAAAGAAAGAGAGATTGTCCTTAGCATTCTTCTATAATCCTGGAGGTGACAAACTCATCA
AGCCTGCACATCAACTTGTTACAAAAGATTGTCCTGCTTTATATTCTCCAATGACATTTA
ATGAGTATAGATCATTCATCAGAACAAAAGGTCTTACTGGAAAATGTCAAATTGAATCAC
TTAAGTCCCCTAGATAATTTGTTATTTAATTGGAAAGTTCTT
