Microarray Probes on PGSC0003DMT400028649
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_2071_PI426222305 |
JHI_St_60k_v1 |
GGGAACTTTGACATATTGCTTCCTAGTTGGTAGGACAATATTTTCGTGGAAAATAAATGA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400028649
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400028649 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) |
Solyc10g085230.1 |
+2 |
0.0 |
577 |
298/322 (93%) |
evidence_code:10F1H1E1IEG genomic_reference:SL2.50ch10 gene_region:63824666-63826235 transcript_region:SL2.50ch10:63824666..63826235+ go_terms:GO:0080044 functional_description:UDP-glucosyltransferase (AHRD V1 **** C0LNQ9_MAIZE); contains Interpro domain(s) IPR002213 UDP-glucuronosyl/UDP-glucosyltransferase |
| TAIR PP10 |
AT5G59590.1 |
+2 |
5e-94 |
293 |
141/281 (50%) |
UDP-glucosyl transferase 76E2 | chr5:24009152-24010585 REVERSE LENGTH=449 |
Transcript Sequence (1206 bp)
>PGSC0003DMT400028649 1206 pgsc_dm_v3.4
TGCAATTTCAGATTCTCAGCTGCTGGATCCATTACCGGAGCTTCATCCCTTGAGATTTAA
GGATGTACCGTTTCCTACCATCAAAAATACAGTTCCAGAATCGATACTAGACTTCTGTAG
AGCAATGAGTGATATAGGATCATCTGTCGCGACTATATGGAACACGATGCAAGACTTGGA
GAGTTCAATGTTATTACGCCTTCAAGAACATTACAAGGTGCCCTTCTTTCCAATAGGCCC
TTTACACAAAATGGCACCTTTGGCCTCATCGACTAGCATACTAGAAGAAGACAATAGCTG
CATCGAGTGGCTCAATAGACATGCCCCAAACTCTGTTCTCTATGTCAGCTTGGGTAGCCT
AGTGAGGATTGATGACAAAGAGCTAATTGAGACAGCTTGGGGATTAGCTAATAGTGATCA
GCCGTTCTTGTGGGTTATTCGACCTGGCTCTGTCTCTGGCTTTCAATGTGCTGAGGCACT
GCCTGATGGTTTTGAGAAAATGGTAGGAGAAAGAGGACGAATAGTGAAATGGGCACCACA
AAAACAGGTGCTTGCACATCCCGGGGTAACAGGCTTTTTCACACATTGCGGTTGGAATTC
TACGGTTGAAAGTATTTGTGAAGAAGTCCCTATGATATGCAGGCCATTTTTAGGAGACCA
ACCAGTGAACGCAAGGTATCTGAGCCAAATATACAAGGTTGGGTTCGAATTGGAGGCTAT
CGAGAGAACGGTCATAGAGAAAACAATAAGAAAACTTATGCTAAGTGAAGAAGGCAAAGA
TGTGAAGAAAAGAGTAGTAGACATGAAACAAAACATAGTTGCTGCTATGCAGATTGAAGG
CACTTCACATAAGAATCTGAATGATTTGGTAGACTTCATTTCTGCCTTGCCATCACGGCT
CGCTCCGCCATTGCCTGTTGTTGGGGCAATCATGAGCTCAAACCATATAGCAAGCAAGTG
TATCATAGAGTCTTGAAGTTATTTTTGAGCTCAAACCATATATTTGTGGCCTGTTAGCTT
GGCAAGACAACAAGTCCTTAATCACAAAAGGAAGAATAAGATAAGAAGTGAACTTTTCAT
AAGTCCATGGTGCAAATGCTGAAGCAGTTTACTTTAGTTTGTTGATTGGTTTTATAAGTT
GGGAACTTTGACATATTGCTTCCTAGTTGGTAGGACAATATTTTCGTGGAAAATAAATGA
TTTTTT
