Microarray Probes on PGSC0003DMT400028158
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_10050_PI426222305 |
JHI_St_60k_v1 |
GGCAAAGGAATACCTAATAGTGTGTCAATATAGTACTTTCATTTAAATCTCCACATCGTC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400028158
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400028158 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G55020.1 |
+3 |
0.0 |
1242 |
591/852 (69%) |
lipoxygenase 1 | chr1:20525798-20530143 FORWARD LENGTH=859 |
Transcript Sequence (2846 bp)
>PGSC0003DMT400028158 2846 pgsc_dm_v3.4
CTCATCTTTCTCGATTGTTTATTTATTTGTTTGAAAAACTTAGAGATCGAAAGTGTTATA
TTATAAGGTATTGTTTTTCACTCTTTCTGTTAAGAAGATAATATATCATCATGTTACTGG
AAAAAATAGTGGAGGCTATCTCTGGGAGAAGTGAGGACAATGGAAAAAAGGTGAAAGGAA
CAGTTGTGTTGATGAAGAAGAATGTACTGGACTTTAATGATGTCAATGCCTCTCTTCTTG
ATGGAGTACTTGAGTTCCTTGGGAAAAGAGTCTCTTTGCAGTTGATCAGCGTTGTTCATG
CTGATCCTGGAAACAGTTTACAAGGGAAACGTAGCAATCCAGCTTACTTGGAGAAGTGGC
TCACTACAGGAACCTCATTAGTAGCAGGTGAATCAGCCTTTGACGTCACGTTTGATTGGG
ACGAAGATATTGGCGTACCAGGGGCATTTATTATCAATAATTTCCACTTCAATGAGTTTT
ATCTCAAGTCACTCACCCTTGAAGATGTTCCTAATCATGGCAACGTTCATTTTGTCTGCA
ATTCTTGGGTTTATCCTGCTAAAAAATACAAATCAGAACGCATTTTCTTTGCTAATCAGG
CATATCTTCCCGGTGAAACACCAGAACCATTGCGCAATTACAGAGAAAAAGAATTAGTGA
ACTTGAGAGGAAATGGAAATGGAAAGCTTGAGGAATGGGACAGAGTTTATGACTACGCGT
TATACAATGACTTGGGTGATCCAGAAAAAGGCAAACAGTATGCCAGGACTATCCTCGGAG
GATCTGCTGAGTACCCGTACCCTCGGAGAGGAAGAACTGGCAGAAAGCCAACAAAAGCAG
ATCCTAAAAGTGAAAGTAGGATTCCACTACTTATGAGTTTAGACATCTATGTACCAAGAG
ACGAGCGTTTTGGACACATTAAGTTGTCGGACTTCCTGACGTATGCTTTGAAATCCATTG
TTCAGTTCCTTATCCCCGAGTTTCAAGCTCTCTTTGATAGCACACCTGATGAGTTTGACA
GCTTTGAGGATGTACTGAAACTTTATGAAGGAGGAATCAAATTGCCCCAAGGCCCTTTTC
TTAAAGCCCTCACTGATAGTATTCCTCTAGAGATTCTAAAAGAAATTATCCGAACCGATG
GTGAAGGAAAATTCAAATTCCCAGCACCTCAAGTTATTCAAGAGGATAAAAGTTCATGGA
GGACTGATGAAGAATTTGCAAGAGAAATGCTTGCCGGAGTAAATCCTGTCATAATCAGCA
GACTCCAAGAATTCCCTCCAAAAAGCCAGTTAGATTCTGAAGTATATGGCAATCAAAACA
GTACAATAACCAAAGAGCATATAGAGAATACACTTGATGGGCTAACGATCGATGATGCAA
TCAAGACTAACAGGCTTTATATACTAAACCACCATGACATCCTTATGCCATATGTGAGGA
GAATAAACACGACAAACACAAAACTCTACGCCTCAAGAACTTTGCTATTCTTGCAAGACG
ATGGAACAATGAAGCCGGTAGCAATTGAACTAAGCTTGCCACATCCAGATGGCGATGAAC
TTGGTGCTGTTAGCAAAGTCTATACCCCAGCTGATCAAGGTGTTGAAGGTTCAATATGGC
AATTGGCTAAAGCTTATGTTGCAGTGAATGACTCGGGTGTCCATCAGCTAATTAGTCACT
GGTTGAATACACACGCAGCCATTGAGCCTTTTGTGATTGCTACAAACAGGCAACTAAGTG
TGCTTCACCCAATTCATAAGCTTTTACATCCTCATTTTCGTGACACGATGAACATAAATG
CTTTGGCAAGACAGATCTTAATCAATGCTGGTGGAGTTCTTGAGATGACAGTTTTTCCTG
CCAAATATGCGATGGAAATGTCAGCTGTAGTTTACAAAAGTTGGGTTTTTCCTGAACAAG
CACTTCCAGCTGATCTTATAAAGAGGGGAGTGGCCGTAGAGGACTCTAGTTCCCCACATG
GTGTTCGCTTGCTAATTCAAGACTATCCATATGCTGTTGATGGCTTAGAAATATGGTCAG
CAATCAAAAGTTGGGTAACCGAATATTGCAACTTCTATTATAAATCAGATGAATTAGTTT
TGAAAGATAATGAACTCCAAGCGTGGTGGAAGGAACTTCGAGAAGAAGGACATGGTGACA
AGAAAGATGAACCTTGGTGGCCTAAAATGCAAACTCGCCAAGAGCTAAAAGATTCTTGCA
CTATTATTATTTGGATAGCATCAGCACTTCATGCAGCAGTCAATTTTGGGCAATACCCTT
ATGCAGGTTACCTCCCAAATCGCCCAACGTTAAGTCGAAGATTCATGCCTGAGCCAGGAA
CTCCTGAGTATGAAGAACTCAAGACAAATCCTGACAAGGCATACTTGAAAACAATCACTC
CTCAACTGCAGACATTACTAGGAATTTCTCTCATAGAGATATTATCAAGGCATGCATCAG
ATGAGATTTACCTTGGACAACGGGACTCATCCGAATGGACAAAGGATCAAGAACCCATTG
CTGCTTTTGAGAGATTTGGGAAGAAGTTAAGTGAGATCGAGGATCAAATTATACAGATGA
ATGGTGATAAGAAATGGAAAAATAGGTCAGGGCCTGTTAACGTTCCATATACATTGCTCT
TCCCTACAAGTGAACAAGGACTCACAGGCAAAGGAATACCTAATAGTGTGTCAATATAGT
ACTTTCATTTAAATCTCCACATCGTCAAGTTTCATTTTTTTCTTTTATTCAATTACAACC
TCAAGTTTGTGTGATGTAACTTTTTCTTGATATATTTCAATATATATAGATGTATTATAT
GTAATGGTAGAACATTTGAATAAGAC
