Microarray Probes on PGSC0003DMT400027448
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_44645_PI426222305 |
JHI_St_60k_v1 |
TGTGCCAATCATCATCCTTCTGTTTGGGGAGACCATTTTCTTGCCTATGCTAATCTTTCG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400027448
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400027448 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G23960.1 |
+2 |
8e-126 |
391 |
216/547 (39%) |
terpene synthase 21 | chr5:8092969-8095128 FORWARD LENGTH=547 |
Transcript Sequence (2391 bp)
>PGSC0003DMT400027448 2391 pgsc_dm_v3.4
ATTATAAGTTAGTCATTTGAGCTCCTTAATTATCGAATAACACCTATTTGATCAATTTTT
TTCTCTCTTCATGTAGTAACTTGAAAGAAGAAGAAAAATGGTTGGACTTGGTGGTGAGAT
GGAGATTACACGTCGATGTGCCAATCATCATCCTTCTGTTTGGGGAGACCATTTTCTTGC
CTATGCTAATCTTTCGGGAGCCAATGAATGGGAAGAGAAGGAACATGAAGACCAAAAAGG
AGGAGTGAGAAAAATGCTAGTGATGGCTCCTTCCAAATCTTTGCAAAAACTTGAACTTAT
AAACACAATCCAATTGCTTGGAGTGGCATACCATTTTGAACATGAGATTGAGGAATTGTT
GAGTTGCTTTTATACTTGTTACGATGACTGGATTGGTGAATTTGGTGAAAGCGACCTTCA
TGTTGTTGCTCTAAGCTTTCGATTACTTAGGCAACAAGGTTATTATGTCTCATCGGATGC
TTTTGGGAAATTCATTAACGAGCAAGGAAGTTACAAGGAAGAACTGGCCAGGGACGTACA
AGGATTATTGAGCTTGTACGAGGCAGCGCAATTCAGAGTACATGATGAAGAAATTCTGGA
TGAAGCAATTAATTTCACCACTACTCATTTGAAGCTAATTTTGCCTAATTTGAGCGATCC
CCTTGCGACTCAAGTCAGTAACGCACTGAAATTTCCAATCAACAATATTATAGTGAGGGT
AGGAACGAGGAAATACATATCATTTTACAAAGAAGATGAATCACACAGTGAAATGTTACT
AAATTTTGCTAAATTGGACTTCAACATCTTACAAAGGTTGCATAAAAAGGAGCTATGTGA
TATCACAAGGTGGTGGAAAGAATCAGAAATCGCGCAGGCACTACCTTTTGCAAGAGATAG
AGTGGTTGAATTATACTTTTGGAGTTTAGGTGTATACTTTGTGCCTCAATATAGTGTTGC
AAGGAAAATATTAACCAAAGTGTTGTGCTTCTGTTCTATTATGGATGACACTTACGATAC
CTATGGTACACTTGATGAACTTACTCTCCTCACAACGGCAATTGAAAGGTGGGACATTGA
TGCTTCAGAACAATTACCGCCATATATGAAACTCTCCTACCGTGCTCTTCTACAAGTTTA
CAATGAAACAGAGAGAGAATTGGAAAATCTTGGAAATAAGACATTCCGAGTCAAATATTC
CATAAATGAGATGAAAAAGTTGTTGAAGGCTTACTTCCAAGAGGCCAAATGGTATCATGC
GAAGGATGTGCCAACAATGGAACAGTATATAAAGAATGGAATTCCATCTAGTACTTACCT
ATTGCTTGCCACTACTTCTTGGTTAGGCATGGGAGATGCAGCAACTAAGGACGCGTTTGA
TTGGATATCGAATGAACCTACAATTCTTGTAGCTTCGTGTATCATTGCAAGATTACTGAA
TGATCTCGTAACACATGAGATAGAGGTGGAAAGAGGAGATGTAGCTTCGGGTATCGAATG
TTACATGAATGAGCATGGTGCAACAACAGAAGAAGCTTACATGGAGATAAGGAAAATAAT
AGAGATTAATTGGAAGGATTTGAATAGAGGATGTCTAAAACCTACAACAGTACCAAGAGT
TTTGCTTATGCCAGTGCTCAATCTTACGAGGGTGGCAGAGTTTTTTTATAAAGATGAGGA
TGCTTATACTTTTTCGAAAAATAACTTGAAAGATGTCATCTCTATGGTGCTAATTGATCC
TATTGAAGCATGAGAGAACCTTAAATGAAAGAACTAGTACTGCATGAACAACATCTAACA
CATTTTGATGTTGCTTCTTTCTTGTGCTGAGTTCTAGCTAGCTAGAGTAGTCTATGTTTT
ATTTAATTATGCACTTTGTTATGGTAGTCAATTGATATATGGATTGCTTTGATACAGTTA
ATACAGACTACAATATATATAACATCACCTAGCATTATATATAGATTAGTCTTTCGAACA
TTCCAACCCCTAGTAATTGGCACTGTAATAATACAAACTACTTTGCTCTTTTTAGTTTTC
ATTGCTCGCTCCCAAAAGGAAAAAGTATAACATCAAATACAGATACAAAATTTTGGATTC
GTGGTTTTCGTACAACCACAAATCCTAGTTTTCGGTTTTTTTTTTTCCTAAAGCAAATCA
TACATGCTCTCCAACCCTCTTTATCTCAGAGTCATCAACCAACGAGAAGATATATTACCT
CTAGCTGGCAGCTGGTAATAATACCCGAGTTATATCTTTAGTTTTGTGTTCATTCATGTC
GCCTCTGAGAAAATATCATCTGCATGTTACAGAGAACTCACTTGTTTCCAGATTTTTTCT
TCATTGTGGCTTTTCGCTTTTCTTCCCTAAGAGCTTTCCTCTTCTCTTCCC
