Microarray Probes on PGSC0003DMT400027158
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_2480_PI426222305 |
JHI_St_60k_v1 |
CAAGACACTCATGCCTCGAGAGGGTGTTTTGTCTTATGGAAGGTGTCAAGGAATATTGAT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400027158
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400027158 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G53450.1 |
+3 |
7e-106 |
311 |
155/170 (91%) |
Putative lysine decarboxylase family protein | chr3:19812977-19815430 REVERSE LENGTH=215 |
Transcript Sequence (923 bp)
>PGSC0003DMT400027158 923 pgsc_dm_v3.4
GGTGTTTTGTCTTATGGAAGGTGTCAAGGAATATTGATTTGGTCTATGGAGGAGGTAGCA
TAGGCCTTATGGGTTTGGTTTCACAAGCTGTTCATGATGGTGGGCGCCATGTTATTGGGG
TCATTCCCAAGACACTCATGCCTCGAGAGTTAACTGGTGAAACAGTAGGAGAAGTGAAGG
CTGTTGCAGGTATGCATCAAAGAAAAGCAGAGATGGCTAGGCATTCTGATGCTTTTATTG
CCTTGCCAGGTGGTTATGGAACTCTTGAGGAGCTGCTTGAAGTGATAACCTGGGCGCAAC
TAGGCATCCATGATAAGCCGGTAGGATTGCTGAATGTGGATGGATACTACAATTCATTAT
TGTCATTTATCGACAAAGCTGTTGAGGAAGGTTTCATCAGCCCAAATGCACGCCACATCA
TTATATCAGCACCATCGCCAAAGGAGCTAGTGAAGAAACTGGAGGAATATGTTCCTTGCC
ATGAAGGAGTTGCTTCTAAGTTGATCTGGGAGACGGAACAACTTGGTTACCCTCAAGCAC
ATGAAATTTCAAGATGAAGGCTGGATTTGCAGCATACTATTACGCGTTAGGACATGATAA
TATCGTATTACTGGAACAAGCTAACCTGAAATTCTTAATTTTTGTCATGGGGAATTAAGG
GTGCTCTTTTTTTTGTTTTTCACCCTGTAAATTACTCCAAACATATCTCAACTCCCCTCC
TTGTTCCCTTCAAGTAGAAATTTCCTTATTTACTGTAAGATGTAACTATTTAAGTTATGC
ATATGGTCTTCTTCTCTAATGTTTACAAAGTCTGCAGTGTAGTTCTGTATTTCTTGTCCT
TTTGTATTACCTCCTTTGTTTCAATTTGTTAGTCTGGTTTTGACTTGACAGGGTGTTTAA
GAAAATAAAAAAGACCTTTGAAT
