Microarray Probes on PGSC0003DMT400027149
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_2500_PI426222305 |
JHI_St_60k_v1 |
CAGTAGCAACATTCACACAATAGGACTGAAATACTTAGATGTTATGTGGAAGCTAACATT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400027149
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400027149 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G67090.1 |
+1 |
2e-175 |
531 |
311/728 (43%) |
Subtilisin-like serine endopeptidase family protein | chr5:26774111-26776321 REVERSE LENGTH=736 |
Transcript Sequence (2812 bp)
>PGSC0003DMT400027149 2812 pgsc_dm_v3.4
ATTTCCATTAACAAAAGTGGCCACAGGTCCACTGACTGAAACTGGTACTATTATTAAAGT
GACCATCCATTGAAAATCTGAAGCTAATCAACAATGACTGTTTCTTAGAGTGTGTATAAA
AGGAGGCTATGTCATAGTTGGAAAACACAAATAAAGAGATATAACTATGAAGACAATACT
ACCTTTTCTTCTCTTTTCTTTGTGTCTTTCTTTGTTTTTAGGAACCTCAGCTGAGAGGTC
TACCTACATTGTCCATTTGGATAAGTCTTTTATGCCTAAAATCTTTGCTACTCACCAAAA
TTGGCATTCTTCCATTATTGATACCCATCAAGATTGAAGCTCCCACTACACAAAATAGCC
ACCATCCCAGTTCCAAAGCTTCTTTATTCTTATGACAATGTGCTTCATGGATTCAGTGCT
GTTTTGTCTAAAGATGAATTTGAAGCTCTCAAGAAGTCACCAGGCTTTCTTTCAGCTTAT
AAAGATAGGCCTGTTGAAGCTCACACTACACATTCCCCTGAGTTTCTTAAGCTTAATCCT
GCTTCTGGGCTATGGCCGGCGTCTGGTTTTGGTGAAGATGTGATTATCGGAGTACTCGAC
ACTGGTGTCTGGCCAGAATCTGCTAGTTTCAGAGATGATGGACTATCTGCAATACCAAAA
AAGTGGAAGGGAATTTGTAAGCCAGGAACAGATTTCAATTCTTCTTTATGCAACAGGAAA
CTCATTGGGGCGAATTATTTCAATAAGGGGCTTTTGGCTAGTGATCCTACTATTGTTCTT
TCCATGAATTCTGCAAGGGATATGAGAGGTCATGGCACTCATGTTGCTTCCATTGCTGCT
GGTAGTTCTGTTAAAGGAGTTTCATATTTTGGATATGCTCCTGGAACAGCAAGAGGTATT
GCGCCACAAGCTAGGATTGCTGTATATAAGTTTAGCTTTGAAGAAGGGACCGTCACTTCT
GATTTAATTGCTGCTATGGACCAAGCTGTTGCAGATGGCGTTGACATACTATCAATTTCT
TATGGGTATGGTTTTGGTCCATTGTATGAAGATTCTATTGCAATAGCTTCTTTTGGTGCC
ATGATGAAGGGTGTGTTAGTCTCTGCTTCAGCTGGGAATAATGGTCCTGAAATGGGAACT
TTATCCAATGGAGTCCCCTGGATCTTTACTGTGGCATCAGGCAGTACTGACCGATCATTT
TCCGGGACTATAACTTTTGGGAATGGCTTAAAGATTACTGGATTTAGCTTGTTTCCAGTG
AGAACCACCATAAAGGATTTTGATTTGGTTTACAATGACAGCTTATCCGCTTGTGAGTCA
TCTGATGATTTAGCCCAAGTCCCTAATAAAGCACGTAGCATCACGATGTGTTATAGCACT
GCACAAGAAGACTTATCAGTCTCTGATCAAATGGGGGCTATCTCAGAGGCAAAATTTGGT
GGCGCACTCTATGTTTATGGAGATCCGGATGTATTGACATCCAATTATTTTACGAATCCT
GGAGCTGTAATTAGCAGCAAGGATTGGGAAAAGGTGGTAGACTATGCAAAAACAAGTGCT
AAACCAAAAGTCAGCATCAGTTTCCAGGAAACACATTTTGCTGTTAAGCCTGCTCCAGTT
GTTTCTGCATTTTCCTCGAGAGGCCCCTCCCTAAGCTATCTACGAGTTGCAAAGCCAGAT
ATTATGGCACCAGGGGAGTTAATTTTAGCAGCCTGGCCATCGAACACTTCAGCTGCAATC
ATTGGTGTCAATACATTTTTGGATAGTGATTACAGGCTTCTTTCAGGCACTTCGATGGCT
GCTCCTCACATTTCCGGAATTGCTGCAATGCTAAAAGGAGTACATCCTGATTGGAGTCCT
TCAGCTATTCGATCTGCCATGATGACCACTGCAAGCCCTTTGGATAATACTGAAAAGCCC
ATCAAGACCATGGATTACCTCAGAACCAATTATGCTACATCTTTATCCATGGGAGCTGGA
CTTGTTGATCCAAACCGTGCAGTTGATCCAGGCCTGATATATGATGCAACTCCACAAGAC
TACGTGAATCTTCTCTGCTCCATGAATTTCACAGAAAAGCAGTTCAAGACAATTGCTAGA
TCATCAGCTAAGCACAACTGTGCAAATCCATCCGATGATATCAATTACCCATCATTTATT
GCTCTCTATATCCCAAATGGGGACTATGCTTGGTTGGAGCAGAAATTCACGAGGACAGTC
ACAAATGTTGGACCCGGTGCAGCTAAGTACAAAGTAAAAGTGAAAGCACCAATAAACTCG
ACAATTTCTATCTCTCCACAGACCTTGGTGTTTGAGAAAAAACATCAGAAGCAGGACTAC
ACTCTTACCATACGTTACAGAGGCATTGAATTTGACCAAGCACAATCTGGTTCAATCACT
TGGGTGGAAAAGAACGGTCATCACACCGTAAGAAGTCCTATAGTAGTTGCTCCAGCGCTT
GATGCCCCAAATGAAAATGATTGATGCCCCAAACTGAAATGCTGCAGTTGATAATACTGT
TGCATTTGTAAGTTTGTAACTCTCCTCAAGAGGGTTCTGTTAAAGTAGCTGGAAGTATTC
TGGCAAAGCATGTGCATGTTTGAAGTAATTGTTGAATAATGTTTTATTTTCTTGTGTTAC
CAAAAAACCAAGACTTTGTTGAATAGATGTTTGATTGGCAATAGGGGTCATTAATCAGTA
GCAACATTCACACAATAGGACTGAAATACTTAGATGTTATGTGGAAGCTAACATTTAACA
ATACAAATTTTGTACGAAATATAAATGAAATAACAAAAAGAATATATCAAAC
