Microarray Probes on PGSC0003DMT400025890
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_7815_PI426222305 |
JHI_St_60k_v1 |
CTTTCACAGCAGAGACTACCTGATATTGCAACATTATTCAGCCAGTTTCTGTTTTATTTT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400025890
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400025890 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G54850.1 |
+2 |
2e-15 |
76 |
43/118 (36%) |
HSP20-like chaperones superfamily protein | chr1:20454440-20455994 FORWARD LENGTH=206 |
Transcript Sequence (1968 bp)
>PGSC0003DMT400025890 1968 pgsc_dm_v3.4
TAGGATTTGATTTTCAGTTCATTTTTTTCCACTTGTTAATTGACATTTGATACACTTTGG
AAAAGATTTTGGTCTAGGGTTCATTCTTTTAGATATCAGGTAATGTTCCTTACATCTTAG
CCATGATGAAGAAGCTGATTTTTTTTTTGTTTCTGGCGATTGACCAATGAAAAGCATTTG
TGTTCTTCTTTATTTAAAGTTTTTGCTTGATGGCTTTCTTATCCTATGATCTGTTTCTTT
GCTATCATCTCTTAGCACTAGGAGGAGCCATGGTAAGTTGTGGCATTTTTTAGGAATTGT
ATTTCAACTCATTTTTGGCTTTTTCAGTTGCTATATGATGCCACGTATATGATCTAAGGT
TTCTTGTCTAACATGTCTAGTTGGTGGAGAGGGAACTAGTATAAAGCGGAATTCAGACCG
GAAAATGCATAGGGTGATGAAATTACATGAGCTTTGTCTAAAATTAGGAGTATAAGCAGA
ACAAAAGATATATTAAAGCTGGATCACTTGTTTCTTCCACTTTGATCTTGGATCTATATC
TTTGGAAGTACCATTTAATGCGTCTATTTGCTGCTTTAAGTAGGCATTATTTGAAAAATG
ACATCTACTAGATTTCTGCTTTTGAAAGATCTAAACAACAGTTCAACATTCAGAATCATA
TAGAAGGCTAGGCAATGTTGTTGTTATTAGACAGAAACCATAGTTCAGCATTAAATTATA
GACATTAAGCATGAGATTATGATTCTTAATTATGTAAATCCTCTTTGAAACGTATGAAGT
GCTGATTAGTAAACTGAATTGCTAATGTCTGTTCTACCTTCGAGAACAGTGCATGAATGC
TGCTAACTTGAGAAACTAACAAGACTACTCTTGACATAGAGCTGATTCAACCATTTACAT
GTACAGAGTTTCACTGAAAACCTCACTGGATTCCCAAATCCCTAGTTCTTTTTATCTTCT
TTTGCTCAGTAGAACCCTCTGTGAGTTCCAAAATAGTGCTTTGCATTTCTGCAGAGCAAG
GTATGCAAAAAAGGCATTTACTTCTGTGCTTTAAAATTTTGTGCTAAATCCCCATTCTTC
GAACTGGCATGTTAACTCATAGCATGCCTAAGATATCGTGTATATTAATGTTATCCAGCC
GCTGTGACTTGTAGTGCGATACGCCAATCTTCTATTTTTACCGACATTGTACATATATTA
AGTTGCCAATTGAGTTCCTTCCTTCTTCCAGTATTCAAACAATGCATATTGTTCAAGGTT
TTAATACACTATAGTTTTACAATCTGCAGGAAGAAATTTCGAAGGAAACACTGAAAACTT
GAATATGATTATCGCATATCCATTTACATTCAACGCACATGTCATACGGACTGGAGCAGC
CCGAGAGGGGAGAGAAGGAGATTCTAATGATACAGTGACTATCACTATAACTGCAATTTC
ATACAAGTTTGAGGTTGTCCTACCGGCTGTTGCAAGAAGCCTTGGCAATTTGTCAGTTGT
TGTTCTTCCTAATGGGAATGTCAAGGTAGAAGGGATTGTAAGAGCTGGGGAAAGAACAAG
CAGTACGGCGCCAACTGTATTCAACAGAAGAACTCGACGGATATTTCCTCTAGGTCACTT
CACCATCAATTTCACCTTGCCAGGACCTGCTGATCCCACAATTGTAAGGGCCAAGTTAGA
CTCAAATGGTGTTTTGAAAGGAACTGCGTTTAAACGTTGGATTGGTAGGTCTGGTTAAAT
TGATGAGTCGTCTGATTAATTGGACATGGTTAGCTTGTAATCTTAATTAAAACCATCTTC
CTACTCTGGAGAATCTTTAGTATTATGGCACTGAAATTCTGTCTGCATCAATATCTTTCA
CAGCAGAGACTACCTGATATTGCAACATTATTCAGCCAGTTTCTGTTTTATTTTATATAT
ATGGTGTAAACTGTTTTTGTTATGTTAGCTGCTTATGGACAATTCTTG
