Microarray Probes on PGSC0003DMT400024052
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_24832_PI426222305 |
JHI_St_60k_v1 |
CATTTGTTGCAAGGAAGGGATAATTTGTAGTACAGGGAATTGGTGAAACTCTTATTGAAG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400024052
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400024052 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G45580.1 |
+1 |
5e-77 |
243 |
141/264 (53%) |
Homeodomain-like superfamily protein | chr5:18481092-18482598 REVERSE LENGTH=264 |
Transcript Sequence (1214 bp)
>PGSC0003DMT400024052 1214 pgsc_dm_v3.4
TTTTTATCGACCCCCAAACCAAAGAAAAAAGATTCAATTTTTAGTTGATCATTTGGTTCT
TTTTCCACTTTGGAGTTGTTGAAACTGTTTATTTTACTTGATAAGCTTTTTGGGTGTTTA
AATTTAGTGTTTTTAGTGACTTGTGTAGGAGTTTTGAGGATTTTGAGGAATTTGGGGGTG
GTGGTGTTCATGGATAGGATGTATAATGGTGGAGGAGATATGGGGTATGGGTATGAAAAT
GGGGTGGTGATGACAAGGGACCCAAAGCCAAGATTGAGGTGGACTGCTGATTTACATGAT
CGTTTTGTTGATGCTGTAACTAAGCTTGGTGGACCTGATAAAGCAACTCCAAAGTCAGTA
CTAAGGTTAATGGGATTGAAGGGCTTGACATTGTATCATTTGAAGAGTCATTTGCAGAAG
TATAGACTTGGACAGCAGACCAAGAAACAAAATACAGCAGATCAAAACAGAGAGAATATA
GGGGAGTCCTTCGGACAATTCAGTTTGCATTCCTCAGGACCGAGTATCACTTCATCAAGC
ATGGATGGTATGCAAGGAGAAGCTCCAATTAGTGAGGCACTGAGGCGTCAGATTGACGTC
CAGAAAAGATTACACGAGCAGCTTGAGGTTCAACAGAAGCTGCAAATGAGAATAGAGGCA
CAGGGAAAGTACTTGCAAGCAATACTAGATAAAGCTCAGAAGAGCCTGTCCACTGATATG
AACTCTCCTAGTGCTGTAGACGAAACAAGAGCTCAGCTTACAGATTTCAATATAGCTCTC
TCAAATTTAATGGACTACATGCACGGACACAACGGGGATGAAACATCTGCAGGTAAAAGG
ACACAAGATGATACTAATAAGGATCTACAAAGGTCTACATACTTAACGGAGGGAGAACAA
AAGAAGATTATGAATATTAAACTTGAAGAAACTTCCGTTAGGTTCGATTTGAACTCCAGA
AGTAGCTATGACTTTATTGGCATGAACTCAGCTGTATTGGAAGCCAAACAATTTTCAAAT
GGAAGATTGGAAATGTAATCATATAAGGTCAAGATTATGTATTTTACTCTAAAGTGTACT
AGGAACCCAGAGTTTAACTTGTTACATGAAGCTCTTATTATAGATTTTATTGCCCTCTAT
CTATGTAATTATTTCATTTGTTGCAAGGAAGGGATAATTTGTAGTACAGGGAATTGGTGA
AACTCTTATTGAAG
