Microarray Probes on PGSC0003DMT400024018
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_24970_PI426222305 |
JHI_St_60k_v1 |
GAGCATGATTAGGAACTTTCCTGTATCTAATTTTAGGTTTACTTAGGATGTGTATAGAGG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400024018
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400024018 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G32080.1 |
+3 |
0.0 |
686 |
366/476 (77%) |
membrane protein, putative | chr1:11537572-11539756 REVERSE LENGTH=512 |
Transcript Sequence (2039 bp)
>PGSC0003DMT400024018 2039 pgsc_dm_v3.4
TTCACATCCACACAAATTTCTTAACTTGCCAGTTCAAAAAATGGACCAACTACATTCTCT
TCTTCTCAAGATTCCTCATGGCGACAGCTTCAGCTGTTCCAAAGAGTTTATTTCTCCCCA
ATTTCCATTACCCAACAACTCCCTATCAAATAAAGCTCAAATCTTTACAAACCCCACTTA
GAATCCTTTCTCAGAAATCCAATTTGAGCTCTAATGGAGTCAATATCAAGACAAATTTCG
TCGAAAATACACAATCCCATGAAAGGGGTGTTAAGAGAATTCACTCTAGTAGAAGACTTA
TTGTTAGATCCATGGGATCAGACAGTAGTGTTGCATCCACAGGGTTACCGAGCAAGGTGT
TTGGAGCATTGCATTTATTAGTTTCACTTGGAATCATACTGGCTATGGATAAATTGTTAA
AGAAAGCATTTGTGGAAGCTGCTATTAAGTTCCCAAGTGCTCTATTTGGAATGTTTTGCA
CATTTGCTGTTCTAACGATTCTTGATTCCGTTGTTCCTAAGGCTGCAGAAGGATTGATGA
ACTTTTTTGAGCCTGCACTTTTGTTTATCCAGAGATGGCTTCCATTGTTTTATGTACCTT
CTTTGGTTGTTCTCCCTCTTGCCGTCAAGGATGTTCCTGCAGCTTCTGGGGCCAAGATTT
GTTTTATACTAGTTGGGGGTTGGTTGGCTTCTCTTTGTGTTGCGGGTTTCACAGCTATAT
CTGTGAGGAAAATGGTAAAGACCGAGATGATACCTGCTGAGCCCATGGCAAAGCCTTCTC
CTTTTACTTCTTTGGAGATGTGGACTTGGAGTGGGATCTTTTTGGCATCATTTGTTGGTG
CACTTTACTATCCGACAGCGCTGGGAACAAGTGCTAGAACATGCTTACCCTTTCTACTTT
CATCTACTGTATTAGGCTACCTAGTTGGATCAGGGCTTCCATCGGCTGTAAAGAAGGTTT
TCCATCCAATCATCTGTTGTGCAGTCTCTGCAGATCTTGCAGCCATTGCTTTTGGATACC
TTTCTAAGTCTGGACTTGATCCAGTTCTTGGGGATTATCTTACAAAGGCCGCATCTAATC
CTGGAGCTGGTGACATTCTCATGGGATTTTTGGGATCAGTCATCATCTCCTTTGCCTTCT
CAATGTTCAAGCAAAGAAAGCTTGTTAAACGGCATGCTGCTGAGATTTTCACCTCTGTCA
TTATATCCACACTATTTTCACTATATTCAACCGCTCTCATTGGAAGGCTGATTGGGTTGG
AGCCAAATTTGACTATATCGATCCTACCCCGATGCATAACTGTCGCACTAGCTCTCAGCA
TTGTTTCTCTATTTGAAGGTGTGAATTCATCCCTAACAGCAGCTGTCGTTGTACTAACTG
GTCTGGTGGGAGCAAATTTTGTTCAGGCAGTGCTGGATAAACTTGGCTTCAATGATCCTA
TTGCTCGAGGAATTGCAACTGCATCAAGTGCTCATGGGCTCGGAACAGCAGCTTTATCAG
CTAAGGAACCTGAAGCTCTTCCATTCTGCGCTATAGCATATGCCCTGACTGGTATATTTG
GCTCTATTATATGCTCCGTTCCAGCAGTAAGACAGAGCCTACTGGCAATTGTCGGCTGAG
CTGACAGTCTAAACATTCATCTTTCTTCATACCAATTCGATCATTCTATTGGGATAATGC
CAGCACAATCACCCAAGTTAAGGTTCAGAAGCCAACGGGTGACTTGCTGTTTCTTCACAA
TGTTCAGATTCTAGATGCAAGGTCTTTATAAAGTTAAGTTTCCATTGTTTCTCTATCACT
CTTGGGGAGCATGATTAGGAACTTTCCTGTATCTAATTTTAGGTTTACTTAGGATGTGTA
TAGAGGTACATATCCATAGTTTTTCGTTGTAAGATTTTTTTCTTGTAAATTGAAATGAAT
TGCTACTTCTTTTATGAAAGTAAGCACAGCTGAATAGCATGAAACTCAAATGTATTTATG
ATCTTATGATTCATAATTATATTCTGGAATGCATATTCCAACCAAGATCAATTATCAAC
