Microarray Probes on PGSC0003DMT400024017
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_24862_PI426222305 |
JHI_St_60k_v1 |
GAGCATGATTAGGAACTTTCCTGTATCTAATTTTAGGTTTACTTAGGATGTGTATAGAGG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400024017
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400024017 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G32080.1 |
+2 |
0.0 |
659 |
353/452 (78%) |
membrane protein, putative | chr1:11537572-11539756 REVERSE LENGTH=512 |
Transcript Sequence (2566 bp)
>PGSC0003DMT400024017 2566 pgsc_dm_v3.4
TTCACATCCACACAAATTTCTTAACTTGCCAGTTCAAAAAATGGACCAACTACATTCTCT
TCTTCTCAAGATTCCTCATGGCGACAGCTTCAGCTGTTCCAAAGAGTTTATTTCTCCCCA
ATTTCCATTACCCAACAACTCCCTATCAAATAAAGCTCAAATCTTTACAAACCCCACTTA
GAATCCTTTCTCAGAAATCCAATTTGAGCTCTAATGGAGTCAATATCAAGACAAATTTCG
TCGAAAATACACAATCCCATGAAAGGGGTGTTAAGAGAATTCACTCTAGTAGAAGACTTA
TTGTTAGATCCATGGGATCAGACAGTAGTGTTGCATCCACAGGGTTACCGAGCAAGGCAA
AAAATTGAATCTTTTTTCTCTTTCATATTGTGAAATTTTGTTGATAGCATGTTTGGCCAA
AATTTTAAAATATGCTTGTTTTTTGGAATTTTTTTTTTTTTTGTTAGGTGCTTTCTAAAA
AGTACTTTTGGAGAGTAGTATTTCGTGTTTGACTAATCAATTTGGAAAACAGTTTTGCCT
ATAATAGAGCAATAGTTTATGGGGTAAAAGACTACTTTTTTAGCTTTTTGTATACCCCTT
TCGTGGGAGCTCCCACCATTTTTGCTCCCTTGGTGACTCGAACTTATAACCTAAGTGTTG
GAAGTGAGGAGTGCTTGACCTCCGAGCAACTCCCTGAAAAAACAGTTTTTATTACTATTC
GAAGCTTGAGTTTTGATTTTTTTTTCTCTTTTGGATGTTTGTTTTGCTGTAGGTGTTTGG
AGCATTGCATTTATTAGTTTCACTTGGAATCATACTGGCTATGGATAAATTGTTAAAGAA
AGCATTTGTGGAAGCTGCTATTAAGTTCCCAAGTGCTCTATTTGGAATGTTTTGCACATT
TGCTGTTCTAACGATTCTTGATTCCGTTGTTCCTAAGGCTGCAGAAGGATTGATGAACTT
TTTTGAGCCTGCACTTTTGTTTATCCAGAGATGGCTTCCATTGTTTTATGTACCTTCTTT
GGTTGTTCTCCCTCTTGCCGTCAAGGATGTTCCTGCAGCTTCTGGGGCCAAGATTTGTTT
TATACTAGTTGGGGGTTGGTTGGCTTCTCTTTGTGTTGCGGGTTTCACAGCTATATCTGT
GAGGAAAATGGTAAAGACCGAGATGATACCTGCTGAGCCCATGGCAAAGCCTTCTCCTTT
TACTTCTTTGGAGATGTGGACTTGGAGTGGGATCTTTTTGGCATCATTTGTTGGTGCACT
TTACTATCCGACAGCGCTGGGAACAAGTGCTAGAACATGCTTACCCTTTCTACTTTCATC
TACTGTATTAGGCTACCTAGTTGGATCAGGGTACGATTCAGCATCTCAGCATGAATAAAT
CTACTTTTCAGTTTATCATGGAAAGTTTCTTCGTTTTTCTTGTTCATCTGGTCTGTACAT
TCATAAGTTTTATATCCTCAGGCTTCCATCGGCTGTAAAGAAGGTTTTCCATCCAATCAT
CTGTTGTGCAGTCTCTGCAGATCTTGCAGCCATTGCTTTTGGATACCTTTCTAAGTCTGG
ACTTGATCCAGTTCTTGGGGATTATCTTACAAAGGCCGCATCTAATCCTGGAGCTGGTGA
CATTCTCATGGGATTTTTGGGATCAGTCATCATCTCCTTTGCCTTCTCAATGTTCAAGCA
AAGAAAGCTTGTTAAACGGCATGCTGCTGAGATTTTCACCTCTGTCATTATATCCACACT
ATTTTCACTATATTCAACCGCTCTCATTGGAAGGCTGATTGGGTTGGAGCCAAATTTGAC
TATATCGATCCTACCCCGATGCATAACTGTCGCACTAGCTCTCAGCATTGTTTCTCTATT
TGAAGGTGTGAATTCATCCCTAACAGCAGCTGTCGTTGTACTAACTGGTCTGGTGGGAGC
AAATTTTGTTCAGGCAGTGCTGGATAAACTTGGCTTCAATGATCCTATTGCTCGAGGAAT
TGCAACTGCATCAAGTGCTCATGGGCTCGGAACAGCAGCTTTATCAGCTAAGGAACCTGA
AGCTCTTCCATTCTGCGCTATAGCATATGCCCTGACTGGTATATTTGGCTCTATTATATG
CTCCGTTCCAGCAGTAAGACAGAGCCTACTGGCAATTGTCGGCTGAGCTGACAGTCTAAA
CATTCATCTTTCTTCATACCAATTCGATCATTCTATTGGGATAATGCCAGCACAATCACC
CAAGTTAAGGTTCAGAAGCCAACGGGTGACTTGCTGTTTCTTCACAATGTTCAGATTCTA
GATGCAAGGTCTTTATAAAGTTAAGTTTCCATTGTTTCTCTATCACTCTTGGGGAGCATG
ATTAGGAACTTTCCTGTATCTAATTTTAGGTTTACTTAGGATGTGTATAGAGGTACATAT
CCATAGTTTTTCGTTGTAAGATTTTTTTCTTGTAAATTGAAATGAATTGCTACTTCTTTT
ATGAAAGTAAGCACAGCTGAATAGCATGAAACTCAAATGTATTTATGATCTTATGATTCA
TAATTATATTCTGGAATGCATATTCCAACCAAGATCAATTATCAAC
