Microarray Probes on PGSC0003DMT400023125
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_5481_PI426222305 |
JHI_St_60k_v1 |
CAACCCACCCCTTAATTAAATGGAAGGCAAATAAATGTGTACAAATATTCCCCCATAATA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400023125
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400023125 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G52720.1 |
+1 |
4e-77 |
242 |
120/239 (50%) |
alpha carbonic anhydrase 1 | chr3:19538804-19541116 REVERSE LENGTH=284 |
Transcript Sequence (1060 bp)
>PGSC0003DMT400023125 1060 pgsc_dm_v3.4
CAAAAATTGAGTTAATGTTCCAACAAAAAAAATTTAAAAAAACTTCTCAGACATTGAGTT
GTCTTTGCTTCAGACATCCTCTCAATGGCTGATGTTGGTGGAATTTCAGTTTGGGTGATC
AATATATGTGTAGTTCTTCTACTCAATCTAATTTCTACTGCATTTGGTGATGCTTTGGGA
GTCAAATTTGGTTACACAGGCCCAGTAGGCCCAAATGGTTGGGGAAGGTTGAGCCCAACA
TATTCAGTCTGCTCAAATGGCAAATCACAGTCCCCAATTAACATAATTAGTCATAATTGT
GCTGTTAACAAGAAGTTAAAGCCCTTGATTATGCAATATAATCATTCTGAAGTTGCTACT
TTGGTTGATAATGGCTTTAATGTTGGGATAAAATATGGTGAAAATGCAGGAAGTTTAATT
GTGGATGGTAAAACTTATAACTTTAAACAAATGCATTGGCATTCCCCTTCTGAACATACA
ATTGATGGCAATCGTTATGCAGCAGAGCTTCATCTAGTTCATTTTGCTCAAGACAATACT
ATAGCAGTTTTATCAATCCTCTTCCATTTGGGCCATCCTGATCCCCTAATGACCAAGCTT
CAAAACAAACTGAATGAGCTAGCAAGGGATGTAGCAACACATAAAGAAACACAAGTGCAG
CTTGGAATAATTGATACACATGAAATAAGGAAACATTCTCACAAATATTACTCATACACT
GGTTCTTTAACAACTCCACCATGCTCTGAAATTGTCTCTTGGTACATTCTTGGCAAGGTG
AGATCAATATCAAGAGAACAAGTAGAAGAATTGAGAGCTCCATTGGATCCAACATGCAAG
AGAAATGCAAGACCAACTCAACCCTTAAATGGAAGACAAATTCAGATGTATGAAGCCCAA
CCCACCCCTTAATTAAATGGAAGGCAAATAAATGTGTACAAATATTCCCCCATAATAAAA
GACTCCTTTGAAAAAAGAAAGTAATATTACGATGATGTGGATGACACATATTGAATCTTG
AAAATTGACCTTTGAGTTATAGTAATGAAAATTGTGCAAG
