Microarray Probes on PGSC0003DMT400022972
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_5619_PI426222305 |
JHI_St_60k_v1 |
GGCTGGGTCAAAGAGAAACATTTCTTTTAGAGCTGCCGCATGTTTTATTACTAAAGAAAG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400022972
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400022972 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G55580.1 |
+3 |
1e-175 |
513 |
286/467 (61%) |
Regulator of chromosome condensation (RCC1) family protein | chr3:20612766-20615730 FORWARD LENGTH=488 |
Transcript Sequence (1926 bp)
>PGSC0003DMT400022972 1926 pgsc_dm_v3.4
CTTCTAGCTGCTTCTGAAACAAAAGTTCTGGAAACTTCTCTGTAGAAAATTTGTGAATTT
CGATTTTTTCTGAAGAAATGAGTGAAAATGGTGGAAGAGAAGAGGAAGAGGAGTTGAAAA
TGGAGGAACAGAAGAAGAAGTATGAGGTGTTAATGTGGGGATATCTTCCCGGAGTATTGT
CTCATAAGTCGCCGTTAACTTCTCCGGTGGAAGTTCAGTTGCCGGATAACGGAATCGATG
TTCAATCATGGAAGGATGTATGTGGAGGAGGTTGTGGTTTCGCTATGGCTATTTCAGCAG
GGTCTGGAAAACTAATCACGTGGGGTTCTGCAGATGATCAAGGCCAAAGCTACTTGACTT
CTGGAAAACATGGGGAGACTCCAGAACCGTTTCCGCTTCCAACTGAAGATCCAATCGTGA
AAGCCGCAGCTGGTTGGGCACATTGTGTATCTGTTACTGAAAAGAATGATGTGTACACAT
GGGGCTGGAAAGAATGTGTGCCTTCTTCCAAGGTTGTTGCAAATTTTGTTTCTGGAGGGA
GTTTTGAAGGGGATGCTATTCGGAAAGAATCAGTGCCAACTGACCAAGAAAGCCCTCAAT
CTCAAGGCTCCAAGCCAATTGGTGGTTCAGTTGCTCACCAAGATAATAAAAAACCTGAAG
AAACTGCAAAGAGGAGAAGAACAATGACGGCTAAACAAGAACTTGAAAGCCCACCCCTTG
CTGACGAATCTCTTTCTGCACCAGCTTGTATTGTAGAACTGGATCCAGGGGTGAAGATAA
CCTCCGTTGCTGCTGGAGGGCGCCACACTTTAGCATTGTCAGATGTGGGACAGGTATGGG
GTTGGGGCTATGGAGGTGAAGGACAGCTTGGTTTAGGCTCCAGGATTAAAATTGTGGCTT
CTCCTCATCTTATACCTTGTCTGGATGCTTCTTCACATGGACCTGACCGGAGCCTTGGGA
GTCCTCAAGGAAGCATTACCACTGGGAGTCAGAAACGTAAAGCCTTGGGGAGCTACATAA
AGAGTATTTCTTGTGGTGGTCGGCATAGTGCAGTAATCACAGATACTGGGGTGCTGCTTA
CATTTGGCTGGGGATTGTATGGACAGTGTGGACTAGGTAATACAAATGACGTGCTGAGGC
CAACTTGTGTGTCTTCTCTATTGAACACTAGAATAGAAGCCGTGGCAGGTGGACTGTGGC
ACTCTGTGTGCTTATGTGATCATGGGCGTGTGTATACTTTTGGGGGAAATCAGTTTGGCC
AATTGGGTCTAGGCACAGGCACCGACCACACAGAGACATCACCTAGACTTGTGGATGCCC
CAATACTGGAGAACAAGAATGCCAAGGTAGTGTCTTGTGGAGCTCGCCATAGCGCAATAA
TGACAGATGACAGCAAAATTTATAGCTGGGGATGGAACAAGTATGGTCAGCTTGGCTTAG
GTGATACAATTGACCGTAATGATCCTTGTGAAGTGCCCACCGACGATTGTATGCCGAAGA
ATGTAGCGTGTGGGTGGTGGCACACACTATTACTTGCTGAAAGCCGTCCATGATCTCTCT
CCGTTATTTGGAGAAAAGCTAAGTAACCCACTGACAGCAACTCTCAGGTTTACTTTCAAG
ATTCTGGAGATGTTAGAGCTGTAGTATTTGTTAAATCAATGTACAGCATGTTGATTGTAA
CATATTTTTAACTCACGTATTCTTCTCAAGTTTTATAGGCTTATTTGGTGTATGATAAGC
TCTTTTTCCTCTTTAAGTTTTACAAAATTCATCTTTTATGGACGATCTTGCTGGCATGTT
AAAGAAAAATGTGGCAAGCTGAGAAATACCATGTAAAGCTTCAGCTTGGCCACTGCAGAT
GGCGAAGGCTGGGTCAAAGAGAAACATTTCTTTTAGAGCTGCCGCATGTTTTATTACTAA
AGAAAG
