Microarray Probes on PGSC0003DMT400022970
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_5504_PI426222305 |
JHI_St_60k_v1 |
GGCTGGGTCAAAGAGAAACATTTCTTTTAGAGCTGCCGCATGTTTTATTACTAAAGAAAG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400022970
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400022970 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G55580.1 |
+3 |
9e-177 |
515 |
279/466 (60%) |
Regulator of chromosome condensation (RCC1) family protein | chr3:20612766-20615730 FORWARD LENGTH=488 |
Transcript Sequence (1923 bp)
>PGSC0003DMT400022970 1923 pgsc_dm_v3.4
CTTCTAGCTGCTTCTGAAACAAAAGTTCTGGAAACTTCTCTGTAGAAAATTTGTGAATTT
CGATTTTTTCTGAAGAAATGAGTGAAAATGGTGGAAGAGAAGAGGAAGAGGAGTTGAAAA
TGGAGGAACAGAAGAAGAAGTATGAGGTGTTAATGTGGGGATATCTTCCCGGAGTATTGT
CTCATAAGTCGCCGTTAACTTCTCCGGTGGAAGTTCAGTTGCCGGATAACGGAATCGATG
TTCAATCATGGAAGGATGTATGTGGAGGAGGTTGTGGTTTCGCTATGGCTATTTCAGGGT
CTGGAAAACTAATCACGTGGGGTTCTGCAGATGATCAAGGCCAAAGCTACTTGACTTCTG
GAAAACATGGGGAGACTCCAGAACCGTTTCCGCTTCCAACTGAAGATCCAATCGTGAAAG
CCGCAGCTGGTTGGGCACATTGTGTATCTGTTACTGAAAAGAATGATGTGTACACATGGG
GCTGGAAAGAATGTGTGCCTTCTTCCAAGGTTGTTGCAAATTTTGTTTCTGGAGGGAGTT
TTGAAGGGGATGCTATTCGGAAAGAATCAGTGCCAACTGACCAAGAAAGCCCTCAATCTC
AAGGCTCCAAGCCAATTGGTGGTTCAGTTGCTCACCAAGATAATAAAAAACCTGAAGAAA
CTGCAAAGAGGAGAAGAACAATGACGGCTAAACAAGAACTTGAAAGCCCACCCCTTGCTG
ACGAATCTCTTTCTGCACCAGCTTGTATTGTAGAACTGGATCCAGGGGTGAAGATAACCT
CCGTTGCTGCTGGAGGGCGCCACACTTTAGCATTGTCAGATGTGGGACAGGTATGGGGTT
GGGGCTATGGAGGTGAAGGACAGCTTGGTTTAGGCTCCAGGATTAAAATTGTGGCTTCTC
CTCATCTTATACCTTGTCTGGATGCTTCTTCACATGGACCTGACCGGAGCCTTGGGAGTC
CTCAAGGAAGCATTACCACTGGGAGTCAGAAACGTAAAGCCTTGGGGAGCTACATAAAGA
GTATTTCTTGTGGTGGTCGGCATAGTGCAGTAATCACAGATACTGGGGTGCTGCTTACAT
TTGGCTGGGGATTGTATGGACAGTGTGGACTAGGTAATACAAATGACGTGCTGAGGCCAA
CTTGTGTGTCTTCTCTATTGAACACTAGAATAGAAGCCGTGGCAGGTGGACTGTGGCACT
CTGTGTGCTTATGTGATCATGGGCGTGTGTATACTTTTGGGGGAAATCAGTTTGGCCAAT
TGGGTCTAGGCACAGGCACCGACCACACAGAGACATCACCTAGACTTGTGGATGCCCCAA
TACTGGAGAACAAGAATGCCAAGGTAGTGTCTTGTGGAGCTCGCCATAGCGCAATAATGA
CAGATGACAGCAAAATTTATAGCTGGGGATGGAACAAGTATGGTCAGCTTGGCTTAGGTG
ATACAATTGACCGTAATGATCCTTGTGAAGTGCCCACCGACGATTGTATGCCGAAGAATG
TAGCGTGTGGGTGGTGGCACACACTATTACTTGCTGAAAGCCGTCCATGATCTCTCTCCG
TTATTTGGAGAAAAGCTAAGTAACCCACTGACAGCAACTCTCAGGTTTACTTTCAAGATT
CTGGAGATGTTAGAGCTGTAGTATTTGTTAAATCAATGTACAGCATGTTGATTGTAACAT
ATTTTTAACTCACGTATTCTTCTCAAGTTTTATAGGCTTATTTGGTGTATGATAAGCTCT
TTTTCCTCTTTAAGTTTTACAAAATTCATCTTTTATGGACGATCTTGCTGGCATGTTAAA
GAAAAATGTGGCAAGCTGAGAAATACCATGTAAAGCTTCAGCTTGGCCACTGCAGATGGC
GAAGGCTGGGTCAAAGAGAAACATTTCTTTTAGAGCTGCCGCATGTTTTATTACTAAAGA
AAG
