Microarray Probes on PGSC0003DMT400022916
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_5701_PI426222305 |
JHI_St_60k_v1 |
TGCCATTTGTACTTCTAACATTTGAGTATGAGTTATTCCCTTCCATATATGGTCTCTCAT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400022916
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400022916 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G52870.1 |
+1 |
1e-178 |
518 |
269/391 (69%) |
IQ calmodulin-binding motif family protein | chr3:19593365-19595686 REVERSE LENGTH=456 |
Transcript Sequence (1869 bp)
>PGSC0003DMT400022916 1869 pgsc_dm_v3.4
GAAAAAACGCAGTCTATATATATAATATATACACACAAACTCCGTCCCACTCATTTCATT
CTCCGGCGACTATTTCTCTCTCTACAACTCTCTCTCTCTAAAACTCACTGGACTTCGTTC
GTTGTCCGAATCTCAAGGCCTTTTGTAGAGCAGAAGCAGTTATTGACCGAATCTCTCTCA
ATGGAAGTCGAAACTACCGGCGTGCCAAATTTTGATCTCACAAACTCTTCCTCACAGGTT
AGTTCTATTCCTCCGTATAGAAAACTCATTGACATGTCGGCTTGTAAACTGACGGAGCTC
CGTATTCCCGATTTTCGGAGCTCCGACGACATGCCGGAACTCGAAGGATTTGGTTCGCCG
GTTTCTGCTGGTGTAGAATGTGAAAACGGTATGGTTTCGTTTCCGGGGTCTCCTTCTGTA
TCTGAAAATGGAGGCCGGGAATGTGATTTTTCTGAGTTCGTTGAAAAGACGCCGTCGAAT
GCCGCGAAGAGATTGCAGAAAGTTTATCGGAGTTATCGTACACGGCGTATGTTAGCTGAC
TCTGCTGTGGTAGCTGAAGAGCTTTGGTGGCAAGCAATAGATTATGCTCGGTTGAATCAC
AGTACAATTTCATTCTTCGATTACTCGAAGCCGGAGACGGCAGTTTCACGGTGGAATCGC
GTCAGCTTGAATGCTTCTAAGGTTGGTAAAGGTCTATCCAAAGATGCTGAAGCTCAGATA
TTAGCTTTTCAACACTGGATTGAGGCTATTGATCCACGCCATCGATATGGACATAACATG
CATATCTATTATGAAGAATGGTGTAAAACTGATGCTGGCCAGCCCTTCTTCTTTTGGTTG
GATCTTGGAGATGGCAGAAAGGTTGATCTCAAAGAATGTCCAAGAGCTAAGCTTCAGAAA
CAATGCATCAAGTATCTTGGACCTCAAGAAAGACAACATTATGAGTACATAATTGCTGGC
GGGCAAATACTGCATAAGCTAACCGGAAGTTTTCTTGACACAACTAAAGGCCCCGATGGG
GCAAAATGGATCTTTGTGATGAGCACATCAAAAAGACTCTATGCTGGTGAGAAAAAGAAA
GGAATGTTTCATCATTCCAGTTTTTTGGCTGGTGGGGCTGCTTTAGCTGCTGGAAGACTC
GTGGTACAGGATGGGACAGTGAAGTCTATTTCACCTTACAGTGGCCATTACCGCCCATCA
GATGATAGCCTCGAAACCTTTTTATCGATTCTCAAGGAACACGGAGTCAACGTGGATGAA
GTTGAGATAAAAAAGGCAAATGAAGACTATGACACCTCCGGAGATGTAAATGTAAATGTA
AAATCTGTTGACAAACGTCCGCCAAAACTTTCAACTCCTCCACAAGCAGTGAAAGAAGAG
AAGAAAGAATCAATTGGATCACCACAAGCTGCAACTAGCTGCTACCAGAGAACGCTCTCA
GGCGGTCTTCACAGCCCGAGAACAGAAGTGCCAAAGACTGCTATACTAGAAAGGATCAAT
TCCAAGAAATCATCAAGATCATATCAACTTGGCCATCAACTATCTCGAGTATGGTCAACA
GGCGCCGGTCCAAGAATTGGCTGCATTGCCGATTACCCTGCTGAACTAAGATGGCAAGCC
TTGGAACTAACTAATGTTTCACCTAAACCTTCTCCATCATCTACTCCTAGACCTTTAGAC
GCTGTTTGTTCGCCTACTTGTTCTTCCCCAGTTTTCAACAATGTACTTGTAAAGTCTTCT
TGAACTCCAAGTCTTTTTTTCCTTCTTAAATTCCATGTTCCTGCTACAATATACTCTAGC
AAGTGTAAATGCCATTTGTACTTCTAACATTTGAGTATGAGTTATTCCCTTCCATATATG
GTCTCTCAT
