Microarray Probes on PGSC0003DMT400022761
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_5838_PI426222305 |
JHI_St_60k_v1 |
CTGTCACAGCTTAGAATCAATAGTAGTACTATATCATCATCATGATGTTGGCAGAAGAAA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400022761
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400022761 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G02230.1 |
+1 |
2e-135 |
394 |
199/294 (68%) |
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein | chr5:449132-450507 FORWARD LENGTH=280 |
Transcript Sequence (1291 bp)
>PGSC0003DMT400022761 1291 pgsc_dm_v3.4
CGAATGCCTTCTAATTTTCCTCCCCCTTCTTCCTTTTCTTCTTACAAAAACACTACTACA
CTTTCACTACAGAGAAAAATTCTTTGTGAATCTTCGTTTTCTTCTCTCAAATCATCCCCA
TTTTGATTCTTGTTTTTTTAGGCCAAGATGGAATATGGACATGTTCAGAGGCCAAAATAC
GACTGTCTTCTTTTCGATCTAGATGACACTCTTTATCCCCTTAGTGCTGGTCTTGCGACT
AGTGTTCGCCAGAATATTGAAGATTATATGGTTGAAAAGCTTGGCATAGAACAAAGCAAA
ATTGAGGAGTTGGGTAATTTACTGTACAAGAATTATGGAACCACAATGGCAGGCCTCAGG
GCAATTGGCTACGATTTCGACTATGATGAGTACCATAGTTTTATCCATGGTAGATTACCT
TATGAAAATTTGAGACCCGACCCTGTTCTGAGAAATCTTTTGCTAAGCATTCCCATTCGC
AAAGTTATCTTCACTAATGCTGATAAGGTCCATGCTCTGAAAGCTCTGAGTAAACTTGGA
TTGGAAGATTGTTTCGAAGGGATATTATGCTTTGAGACACTGAATCCAGTTCACAAGAGC
ACTCTATCAGATGACGAAGACGACATTGAGTTTGTTGGATCAGCCATATCCTTCAACGCC
ACTGCTACTAACGGCTCTGAGATTTTTGACATTATTGGACACTTTTCTCAACCTAAGGCT
GGATCAGTGTTGCCAAAGACACCAATTGTCTGCAAACCTTCAGAAGTTGCCATTGAACGG
GCTTTAAAGATTGCCAACATTAACCCTCACAGAACACTTTTCTTTGAAGATAGTGTCCGT
AACATTAAAGCTGGCAAGCATGTAGGTCTTGATACAGTATTGGTTGGAAATTCCCAAAGA
GTTGCAGGTGCAGATTATGCATTAGAAAGCATCCACAACATAAGAGAAGCAATACCACAA
CTTTGGGAAGTTGACAGGCTGGCTGAAGTTAACTACTCTGGTGTAGCTGTTGAGACATCT
GTCACAGCTTAGAATCAATAGTAGTACTATATCATCATCATGATGTTGGCAGAAGAAAAA
AAAAATCAAGAATGATTGTGGGAAGATCCAAATGTCCTGTCAAATTTGATTTAAATGATG
TTGATGTTTTGTTGTCATTATTATCAATTAATAACTAGTTAATAGTATTTCCTTTCCATT
CACAAATCTTGTAAATAAATTCCATATTTATCACTCTACCTTTCTATGATTATATAATAA
AGTTCAATTATTAATTGTTCCAAAGGATAAA
