Microarray Probes on PGSC0003DMT400021900
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_49001_PI426222305 |
JHI_St_60k_v1 |
GAACAAGGTAGGGTTGGATTGTGACTAGAACTATTTTTTGATGTTGGTTTCTCTTTTTTG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400021900
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400021900 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G38280.1 |
+1 |
2e-172 |
523 |
252/273 (92%) |
AMP deaminase, putative / myoadenylate deaminase, putative | chr2:16033767-16038793 REVERSE LENGTH=839 |
Transcript Sequence (2455 bp)
>PGSC0003DMT400021900 2455 pgsc_dm_v3.4
AGCACCTACCCATGCCATACAACATTCAACTCAGATGAGTTGAGGAAAATAAAAAGTCCG
CTTGATATTGGGTAACTCAGATAGTCTTATCCCAATTGAACTGACTTCCAATTTATTGAA
GTTATTTAATGATGCTTTATGATTTCTGTTGCAGGTCGTTTTCTTGCTGAGCTGACTAAG
CAAGTATTTTCTGATCTTTCTGCGAGCAAATATCAAATGGCAGAATACAGGATATCAATA
TACGGCCGAAAGATGAGCGAGTGGGACCAACTTGCTAGCTGGATAGTGAACAATGAACTG
TACAGCGAGAATGTTGTCTGGTTGATTCAGCTTCCGAGACTGTATAACATATACAAAGAA
ATGGGGATTGTGACATCATTTCAAAATATCCTTGACAACATCTTTCTGCCCTTGTTTGAG
GTCACTGTTGACCCAGATTCACATCCCCACCTGCACATCTTCTTGAAGCAGGTTGTTGGA
TTGGATTTGGTGGATGATGAAAGCAAACCAGAAAGAAGGCCTACCAAACACATGCCTACA
CCTGCTCAATGGACTAACGTATTCAATCCTGCATTCTCATACTATGTCTACTATTGTTAT
GCTAATCTCTACACCCTGAACAAGTTGCGTGAGTCAAAAGGCATGACGACCATCAAATTC
CGGCCACATTCTGGGGAGGCTGGAGATATTGACCACCTTGCCGCAACATTTTTAACATCC
CATAATATTGCTCATGGTATCAATTTGAGAAAGTCTCCGGTTCTTCAATACTTATATTAC
TTGGCTCAGATTGGTTTGGCAATGTCTCCTCTTAGTAACAATTCTTTATTTTTGGACTAC
CATCGGAATCCTTTGCCCATGTTCTTCTTGAGGGGCCTGAATGTTTCTCTTTCAACGGAT
GATCCTTTGCAAATTCACTTAACAAAAGAAGCCCTGGTTGAAGAGTATAGTATAGCTGCG
TCAGTGAGTATTCTTTGTTCTTGGCTGAAAGACTTGATGATGTCACTTTGTCAAGGGGTT
TAATTGTTTTCGCCATGCAGGTTTGGAAGTTGAGTGCATGTGATTTATGTGAGATCGCCC
GCAATTCAGTTTACCAGTCCGGTTTCTCACATGCGCTAAAGGTTTGTGTATCTCCTAAAA
AATTTAATTGCTAATAGCATGGTACTCTGATCCCAGCTCCTCAATATTCAGCAAGCTCGT
GCCTTTTCACAATTGCTACCAATCTCTGCTTTCACCAATTTTCATTAATCAGTAGATGCA
CACTTCCAATGTTTGTAGATCCACATGGATGCCTCGAAGTGCAATGCATCTAACTGAAAT
CTCATATGTCTATGTTTTTATGTAAACCATATTGCTAGTAGAGAGTTCCATTAGGGGTCG
CCTTCATGTTACCTTTCTCAAAAGAAAAAAAAACATTCCATTAGGGGCACCCTTTTATTC
GTTGTCACTGTGCTCATTTACTGTTTCTTGTTGTTAGGATGAGTACATGGAATATTGAGG
TTCAGTAGTGAACTTGTAATTGTTTGATTGCAATCATGTTCTGATTTTCCATGTTTCCTT
TTTGGGTTTGGGTGTTGATTCTCTGGCTTTTGGCATCGATGACACTTTCTGCATATTTTA
CTTGTTTTCCTCCTATTGCTTATCTTACCTAAATTGCTGGTGTGTGCTAATCCCCCGGTT
GGGAATTTTGATGCTTGTGTATGTGTTTTTTCCTGACATATTCAACTTCTATGCTTAGTC
CCACTGGATTGGGAAGGAGTATTACAAGAGAGGACCAGATGGAAATGATATTCATAGGAC
AAATGTGCCTCATATCAGGCTTGAATTCCGCGATATGATATGGAGGGAGGAGATGCAACA
GGTTTATCTAGGCAAGGCTGTATTTCCTTCATTTGTTGACCCATGATCTGCATTGCTAAT
GCATTTATATCACAGACAAGAGTATACGTTCAGAATATCTGGGGGCTTGGCCATCCAGAG
ACTCTAGAAAGCTTCTCCACCATGAGATATATCTAGAATTTGGATGTTGAGGGGAAAATA
AGATTTGATGAATGCTAGACCTTATTATTCAATAAGAGTGATCTATGAAGACTGGTAATT
GAGGAAGCAACTGGAGCTCTAGCATATATATAGCACAACTGCAAAGCAGTCCACTATCTG
AATAAGGAATTATGTATAATATATCCTAGTGGTAGGTTAACAAACTTTAGATGCATTGTA
AGATGAATTCTGAATGTTGCATGGTCCCGTTGTACCATATTTTGACATGTTGGCTAAAAT
AAAGAGATTGATTGCGCCATTTTTCATTTCTCTACCCTTTCGGGTGCAGAGTTGCAAGGC
TGTTGTTTGGGAACAAGGTAGGGTTGGATTGTGACTAGAACTATTTTTTGATGTTGGTTT
CTCTTTTTTGTTATGTTGTTTGTACAAGGGGTTCTCCCAATTGTTAATAATAAAC
