Microarray Probes on PGSC0003DMT400021130
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_22942_PI426222305 |
JHI_St_60k_v1 |
GCGACTTCCAATCCACTAGTCAATCAGAAATCAACAAAGAGAAAGGAACGCGAGAAAAAG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400021130
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400021130 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G42300.1 |
+1 |
5e-63 |
215 |
152/323 (47%) |
basic helix-loop-helix (bHLH) DNA-binding superfamily protein | chr2:17621542-17624635 FORWARD LENGTH=327 |
Transcript Sequence (2055 bp)
>PGSC0003DMT400021130 2055 pgsc_dm_v3.4
CTTGTGTTATATTTGGTACCTTAAATTTTGGTAAGTGCACAAAAACCAAAGCAAATATTG
CTTTAAGGCAGCGGCTACTCAGAAAAAAGGGCACATCCTTTTTATAGAGTCAAAGATAAG
AAAGACTACAGTAGTACACAGAGTTGCAGAGAAGACCGCCATTGAAGCTCTTAATAAAAA
CTCCATATTAGAAACAATAAGCTCTGCAAAATTCCAAAAAAGAAGAAGAAAAGAGAAGAA
GTATATAGAAAGCTTCATTTTTTTCTTCAAATACCTCCATTTTTCTCTTCTTTTTGTTAG
TGTTTTGAACCTCATTGACTTGAATTTGTGGGGTTACTATGGAGTAATCTCTGTTTAAAT
TTGTGGGGTTTGTTTAAAATTTTCAGTTGCAGTTTGCAGCATTAACGAAATTCGAGAAAC
TGTAGAAATTGAGCTTGGGGTTGTCTTGTTGAGTCTCATTTTGGAATTGGGTTAGCTGTG
TTGTATCAAAGTTGGGTTTGGTTTTTCTGTGAAATGGATAATCTGATAGAGTCAATTGAA
GCAGGAGAAGCTAGATCCGAGAATTGCGGAGCTAGAATGGGAGAAATAGGAACTGGGTTT
CATCAATTTGGTGAGGAAATCTTGTCTGTTACGTCGGAAGGTGGAAGTTCTTTCACTGCT
TTACTTGGGCTTCCACCGAATCAAGCGGTGGAGCTTTTGGTTCAGTCACCGGAAGCTGAC
AAAATGACATCAGATAAGCTCGCTATCAGTGAACCTCACTATCGTTATCCTCCTCCTCCG
ATTTTTCCTTCAGATATCGCTTTGATCGACAGAGCTTCTAAGTTCTCCGTCTTCGCCGCC
GCCGGTAACTCTCCGGAGTCCAATTCAACCCTTTCAAATTCCGGATCGAAATCACTGTTC
GTCAAACAAGAACCCATAGATTCCGAATTTAACCACAATTCATCTCCGGCGACTTCCAAT
CCACTAGTCAATCAGAAATCAACAAAGAGAAAGGAACGCGAGAAAAAGGTAAAAGAAACT
TCTAAAAAGGGGAAAAAATCAGCTAACGATACCTCAGAAGACGGCGGTGAGAAGCTACCA
TATGTTCACGTCCGAGCGCGTCGAGGCCAAGCCACTGATAGCCATAGTTTAGCAGAAAGA
GCAAGGAGAGAGAAGATTAATGCTAGGATGAAGCTACTACAAGAACTGGTCCCAGGATGT
AATAAGATCTCAGGTACTGCAATGGTGTTGGATGAAATCATCAACCATGTACAGTCCCTA
CAGCGTCAAGTGGAGTTCTTATCAATGAGACTTGCTGCGGTTAACCCGAGAGTTGATTTC
AACCTTGACAGTCTCTTTGCGGCAGAACGAAGTGGTTCCCATGTGGAGAGTAACTTACAA
GACATGGTTGTGCCACCTATCTGGGCCGAGGGACAAACCAGCGGAAACAGAAACCAATAT
CAACATCTATGGCATTATGAAGGGTTCCATCAGCCTGCCTGGGGAAGGTTAGAAGACAAT
TCTAGCTTTGTTACTCCAGAGAACTCGCTGTTGACATATGATTCCTCAGCAAATTCAGCA
TCCTTACACCCAAATCAGCTGAAAATGGAGCTATGAAAGAAGAAGCAAGTCTTTACTAGT
GATTAGCTGTATATATATCGGACATATTAGTTGATAGCAGCCAGTGCCAGAGAAGAGAGT
TATCAAGAATTCAGATTTTGGGTTTCACCTTCTTCTAATCAAACAGCAAGGAGAAACTCC
AGTTTGATCTCTGCTAGGGAGGAAGAAAATTACGCGTATCCCTTGTTCCTATTTATATAA
CATATATATATGTATGCAGAAAGATTTGTCTATACGAACATAGGGTCATTCAATCTGATA
CTTGGTACGCGAGATGATTGATTGATTCGTAGTTGTAAAACAAGAACAAACTAGTGGTGA
CTATTACATTGTTATGCAGGCAAGGTTTCGTGCTATTTGCCCCTTCTGCTGAAATTTCTT
GTGCTGTAATTATGAGAGAACTTGAGAAGCAATAAAAAGAAGAACATTGGAAAATTGAGA
AGGCTTCACTTTCAG
