Microarray Probes on PGSC0003DMT400021087
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_23105_PI426222305 |
JHI_St_60k_v1 |
GTTGTTCGATAAGGTCCACAAGTTAATTCGAACATCATCGTCAGATTGGAAAATGAATTA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400021087
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400021087 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G41690.1 |
+2 |
2e-14 |
72 |
49/115 (43%) |
heat shock transcription factor B3 | chr2:17381723-17382577 FORWARD LENGTH=244 |
Transcript Sequence (1097 bp)
>PGSC0003DMT400021087 1097 pgsc_dm_v3.4
TGATTTAGAAAACCATAGTATGTAAGGATGAAATTAACTACAATATAATCATCATCCATA
TAATTGAAGTCTCTAAAAAGACATGCATTTGAATTTATGATTAAGCTAGGATCGTAAATT
TACTACGGAATGGTATATAAAGTGAACAAATCTCAATGAATACAATAGCAATTAGGGATA
TGTATATATCTTGATAGCATTTCTGTTATATACATCGTCAGTAGTAATAAAAAAATATTA
TAGTAAATCAAGTTTGAGACTAATAACATACAATATGATACAACATTTCTTAGCCTAGAA
CCATATCTTTAATTTTGTTGAGTATAGTTCTTGTGATCCATTGATTAATTCAATCCTAAA
TTATTTCATGTGTGACTAGGGTTTTCGTAAAGTTACAACAAGTCAGTGGGAGTTCAGCAA
CGACTTGTTTCGCAAGGGAGAGAAGGATTTACTATGTGATATTCGTCGAAAAAAAGCATG
GACAAACAAGCAACAACCTCCAAACAAAAACAACAAGAAAGAAAGTGAAGATGAAGATCA
AAAGTCATCATCTTCAACTTCTAATTCTTCATCATCATTTGAGTACAATAGCCTTGTTGA
TGAGAATAAAAGGCTTAAAATGGAAAATGGAGAACTAAGCTATGAGCTTTCACTAGTAAA
TAAGAAATGCAAAGAACTTATTGATCTAGTGGCCATTTTGTTAAAGAATTCAAATGAAGA
AGAAAAAAAAGAAGGGCAAAAAGGTAAAAGGCCAATGTTGTTTGGAGTGAGGCTAGAAGT
TGAAGAAGAAATGGAAAGGAAGAGAAAAAAAGTTGAGTTAAATGAAATTGCTAGTGTTTT
CCTCTCTCAAACTATGCAAATAAAATAGGAAAAAAGAGATATATATTATTGAATAGAGTT
GTTCGATAAGGTCCACAAGTTAATTCGAACATCATCGTCAGATTGGAAAATGAATTATAT
GTATTTTAATTGCAAGTCTTTCATCTTTTCAAGACTTATAAAGAGTCACAATCTCTTGTA
ATTTGATAATATATAGTTAACTTAATTATATATATCGATAATGTAAAATGTAAAACATTA
TCAATAAGAATGTCAAA
