Microarray Probes on PGSC0003DMT400020345
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_21190_PI426222305 |
JHI_St_60k_v1 |
CCTGCATGCTCATTCTTACTATAATGTTCTCTTGTTCCTTAATTATGGGACATCTAACAT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400020345
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400020345 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G50180.1 |
+3 |
9e-41 |
157 |
128/362 (35%) |
NB-ARC domain-containing disease resistance protein | chr1:18584235-18587136 FORWARD LENGTH=857 |
Transcript Sequence (1614 bp)
>PGSC0003DMT400020345 1614 pgsc_dm_v3.4
GCCTCATGAATTTTGACGAAAGTTGGAATTTACTACACAAAAAGATCTTTGAAAAAGAAG
GTTCTTATTCTCCTGAATTTGAAAATATTGGGAAACAAATTGCATTAAAATGTGGAGGGT
TACCTCTAGAAATTACTTTGATTGCTGGACTTCTCTCCAAAATCAGTAAAACATTGGATG
AGTGGCAAAATGTTGCGGAGAATGTAAGTTCGGTGGTAAGCAGAGATCTTGAAGCAAAAT
GCATGAGAGTGTTGGCTTTGAGTTACCATCACTTGCCTTCTCACCTAAAACCGTGTTTTC
TGTATTTTGCAATTTTCGCAGAGGATGAACGGATTTATGTAAATGCACTTGTTGAGTTAT
GGGCCGTAGAGGGGTTTTTGAATGAAGAAGAAGGAAAAAGCATAGAAGAGGTGGCAGAAA
CATGTATAAACGAACTTGTAGATAGAAGTCTAATTTCTATCCACAATTTGAGTTTTGATG
GGGAAATAGAGAGATGTGGAATGCATGATGTGATCCGTGAACTCTGTTTGAGGGAAGCTC
GAAACATGAATTTTGTGAATGTTATCAGAGGAAAGAGTGATCAAAATTCATGTGCACAAT
CCATGCAGTGTTCCTTTAAGAGTCGAAGTCGGATCAGTATCTATAAGAAGGAAGAATTGG
CTTGGTGTCGTAACAGTGAGGCTCATTCTATTATCATGTTGGGTGGATTGAAATGCTTCA
CACTGGAATTGTCTTTCAAGCTAGTAAGAGTACTAGATCTTGGTTTGAATATATACCCAA
TTTTTCCCAGTGGAGTACTTTCTCTAATTCATTTGAGATACCTATCTTTGTGTTTTTATC
CTTGCTTAAAGCAGTATCGAGGATCGTTAAAAGCTGTTCCCTCATCAATAATAGACATTC
CTCTATCGATATCAAGCCTATGCTATCTACAAACTTTTAAGTTTAACTTTCCGTTTCGTG
ATTGTGCTTATCCTTTCATATTACCATCGGAAATTTTGACAATGCCACAATTGAGGAAGC
TGTGTATGGGCTGGAATTACTTGCAGAGTCATGAGCCTACAGAGAACAGATTGGTTTTGA
AAAGTTTGCAATGCCTCAATCAATTGAATCCTTGGTATTGTACAGGGTCTTTTTTTAGAC
TATTTCCCAATTTAAAGAAGTTGAAAGTATTTGGCGTCCCAGAGGACTTTCGCAATCACA
AGGACCTGTATGATTTTCGCTACTTATATCAGCTCGAGAAATTGGTATTTGATACTGTAA
CAACAGATGAAGATGATGATGATGATGACTTTGAGAAAGAAGTTGCTTCTTGCCGCAATA
ATGAGTAAGTTCTTATACCTGCATGCTCATTCTTACTATAATGTTCTCTTGTTCCTTAAT
TATGGGACATCTAACATATTATTTTCCATTTTTTGCGTCTTTTTTTTATTCTGCAGCAAG
TAGTTAAGGTGTTCTGAGGACTAGCCATTTTCATAACTTGTGGCAATTAATTTGTCCATT
TTCATACTGAGAGTGAGAGATAGTCCTATTTTTTGGATATATGGCTTATGCTGCTGTTAC
TTCCCTTATGAGAACCATACACCAATCAATGGAACTTATTCGATGTGATTTGCA
